RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 LYVE1Q9Y5Y7 322 aa11.74□□□□□ -0.53
SPTBN1-202ENST00000356805 EPHB3P54753 998 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CAMK1Q14012 370 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 OTUD3Q5T2D3 398 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 STRIP1Q5VSL9 837 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 BROXQ5VW32 411 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 GPRC5AQ8NFJ5 357 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 MLPHQ9BV36 600 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 PCDH9Q9HC56 1237 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CCL15-CCL14A0A0B4J2E2 113 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 MSH4O15457 936 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 HIST1H2ABP04908 130 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CYP2C8P10632 490 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CCL15Q16663 113 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 HIST3H2AQ7L7L0 130 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 SLC20A1Q8WUM9 679 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 EZH1Q92800 747 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 HIST1H2ACQ93077 130 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ASB2Q96Q27 587 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ZMYM5Q9UJ78 669 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 NAALADL1Q9UQQ1 740 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 TMEM2Q9UHN6 1383 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 KHDRBS3O75525 346 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 STAG3L1P0CL83 205 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 PUDPQ08623 228 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ANGEL2Q5VTE6 544 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 DOK6Q6PKX4 331 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 PRR23BQ6ZRT6 265 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ACOT1Q86TX2 421 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 GRPEL2Q8TAA5 225 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 TINF2Q9BSI4 451 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 EFCAB6Q5THR3 1501 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CCDC189A1A4V9 331 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CCDC154A6NI56 674 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ECDO95905 644 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 PNPLA4P41247 253 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ITGADQ13349 1161 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 NR1D2Q14995 579 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 DHDDSQ86SQ9 333 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 PDPRQ8NCN5 879 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 DCUN1D5Q9BTE7 237 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 NLRP1Q9C000 1473 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 MAGEB16A2A368 324 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CYB561D2O14569 222 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ZNF12P17014 697 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ACO1P21399 889 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 SRP54P61011 504 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 PTSQ03393 145 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CSHL1Q14406 222 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 SFRP1Q8N474 314 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 FICDQ9BVA6 458 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CCDC59Q9P031 241 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 MYL12BO14950 172 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 TSPAN19P0C672 248 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CCNA2P20248 432 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 LTKP29376 864 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 IL2P60568 153 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 AGKQ53H12 422 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 TCHHL1Q5QJ38 904 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 RIPOR1Q6ZS17 1223 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 IQCF2Q8IXL9 164 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ADGRF2Q8IZF7 708 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CLIP3Q96DZ5 547 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 MTMR12Q9C0I1 747 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 TRIT1Q9H3H1 467 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ACTR8Q9H981 624 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 RHOCP08134 193 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 FAM228BP0C875 321 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 BIKQ13323 160 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CBWD3Q5JTY5 395 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CBWD5Q5RIA9 395 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 NT5DC1Q5TFE4 455 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ACAD10Q6JQN1 1059 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 ULK2Q8IYT8 1036 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 CKAP2Q8WWK9 683 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 SLC25A23Q9BV35 468 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 NIF3L1Q9GZT8 377 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 C17orf75Q9HAS0 396 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 PRMT7Q9NVM4 692 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 NARFQ9UHQ1 456 aa11.73□□□□□ -0.53
SPTBN1-202ENST00000356805 VTNP04004 478 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 TCF7P36402 384 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 RHOAP61586 193 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 ING4Q9UNL4 249 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 EGFRP00533 1210 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 DRG2P55039 364 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 NAA20P61599 178 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 FAM20CQ8IXL6 584 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 GRIP2Q9C0E4 1043 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 DNAJC16Q9Y2G8 782 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 PCDHGA3Q9Y5H0 932 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 HS6ST1O60243 411 aa11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 CELF2O95319 508 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-202ENST00000356805 MPOP05164 745 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms