RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 PAGE2BQ5JRK9 111 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 ZNF605Q86T29 641 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 TOR4AQ9NXH8 423 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 TAS2R13Q9NYV9 303 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 ZBTB14O43829 449 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 CYP2F1P24903 491 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 PRR23CQ6ZRP0 262 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 MTDHQ86UE4 582 aaKnown RBP5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 RERGQ96A58 199 aaPredicted RBP5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 NSUN4Q96CB9 384 aaKnown RBP5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 CAB39LQ9H9S4 337 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 SEC24CP53992 1094 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 TBX4P57082 545 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 OR56A4Q8NGH8 313 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 ITFG1Q8TB96 612 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 IGFLR1Q9H665 355 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 NMRAL1Q9HBL8 299 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 ACOT9Q9Y305 439 aa5.9□□□□□ -1.47
SRGAP1-201ENST00000355086 A0A1W2PRG6 482 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 RBAK-RBAKDNI3L0D1 243 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 PQBP1O60828 265 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 POLR2EP19388 210 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TRAF3Q13114 568 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 PPIL2Q13356 520 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 KLHL23Q8NBE8 558 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 MTFMTQ96DP5 389 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TMEM176AQ96HP8 235 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TSPAN3O60637 253 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 PRKAA2P54646 552 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 SYN2Q92777 582 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 CBWD1Q9BRT8 395 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 NUAK2Q9H093 628 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 BTBD3Q9Y2F9 522 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TRIM66O15016 1216 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 SH3BGRLO75368 114 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 ZNF37AP17032 561 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 BGNP21810 368 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 NRG3P56975 720 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 BNC1Q01954 994 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 MGAT5Q09328 741 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 NFE2Q16621 373 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 ZDHHC13Q8IUH4 622 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 PAFAH2Q99487 392 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 CD248Q9HCU0 757 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 SCGNO76038 276 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 HPS6Q86YV9 775 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 CDHR2Q9BYE9 1310 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 A0A1W2PQJ5 194 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 ANKDD1BA6NHY2 528 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 POLR2LP62875 67 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 STK32CQ86UX6 486 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 PCDHGA3Q9Y5H0 932 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 ATP9AO75110 1047 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TCEA3O75764 348 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 RGS20O76081 388 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 SMCO1Q147U7 214 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TAF5Q15542 800 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 GPAT3Q53EU6 434 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 DHFR2Q86XF0 187 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 PABPC3Q9H361 631 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 NOL6Q9H6R4 1146 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 THAP1Q9NVV9 213 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 O00370 1275 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 KPNA3O00505 521 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 CLOCKO15516 846 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 RPLP2P05387 115 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 FAM126BQ8IXS8 530 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 ZSWIM1Q9BR11 485 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 PRRG4Q9BZD6 226 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 SMPD4Q9NXE4 827 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 DDX43Q9NXZ2 648 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 LIN7AO14910 233 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 NFIXQ14938 502 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 MARK2Q7KZI7 788 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 GPSM1Q86YR5 675 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 NEK7Q8TDX7 302 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 ATG4AQ8WYN0 398 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 REXO5Q96IC2 774 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 MARK1Q9P0L2 795 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TMEM216Q9P0N5 145 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 SCAF8Q9UPN6 1271 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TBKBP1A7MCY6 615 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 XYLBO75191 536 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 FXR2P51116 673 aaKnown RBP eCLIP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 IRAK1P51617 712 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 CBWD6Q4V339 395 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 CYB5D1Q6P9G0 228 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 CAMK1DQ8IU85 385 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 CXorf40AQ8TE69 158 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 MPP4Q96JB8 637 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 ATXN3LQ9H3M9 355 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 NRDE2Q9H7Z3 1164 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 TNFAIP8O95379 198 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 SRSF11Q05519 484 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 KCNMA1Q12791 1236 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 PLEKHH3Q7Z736 793 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 METTL6Q8TCB7 284 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 DPF2Q92785 391 aa5.89□□□□□ -1.47
SRGAP1-201ENST00000355086 C1QTNF1Q9BXJ1 281 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms