RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 PAFAH1B3Q15102 231 aaKnown RBP20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 C5orf22Q49AR2 442 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 TMCO3Q6UWJ1 677 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 Q7L0L9 218 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 KLHL7Q8IXQ5 586 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 C12orf50Q8NA57 414 aaPredicted RBP20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 NOA1Q8NC60 698 aaKnown RBP20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 MYEOVQ96EZ4 313 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 KRT12Q99456 494 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 CDX2Q99626 313 aaPredicted RBP20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 FRMD8P1Q9BZ68 369 aaPredicted RBP20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 GDE1Q9NZC3 331 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 HEY1Q9Y5J3 304 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 WASH4PA8MWX3 477 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 NR2C2P49116 596 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 GBE1Q04446 702 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 SNX1Q13596 522 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 ZNF77Q15935 545 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 BBS7Q8IWZ6 715 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 MMGT1Q8N4V1 131 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 RIN3Q8TB24 985 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 KIF9Q9HAQ2 790 aa20.72■□□□□ 0.91
SIGMAR1-202ENST00000353468 TRDMT1O14717 391 aaKnown RBP20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 CNTN5O94779 1100 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 RHOQP17081 205 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 CHRNA3P32297 505 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 COILP38432 576 aaPredicted RBP20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 IRAK1P51617 712 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 SLC10A2Q12908 348 aaPredicted RBP20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 USP4Q13107 963 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 NOMO1Q15155 1222 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 ALFQ53S48 1182 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 RABGAP1LQ5R372 815 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 DRICH1Q6PGQ1 229 aaPredicted RBP20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 NLRP14Q86W24 1093 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 FAM217AQ8IXS0 508 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 CELF5Q8N6W0 485 aaKnown RBP20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 RTL3Q8N8U3 475 aaKnown RBP20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 SMRP1Q8NCR6 262 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 ASB16Q96NS5 453 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 DNPEPQ9ULA0 475 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 CDH7Q9ULB5 785 aa20.71■□□□□ 0.91
SIGMAR1-202ENST00000353468 REV3LO60673 3130 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 EFCAB8A8MWE9 144 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 LIASO43766 372 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 MFSD11O43934 449 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 TSPAN3O60637 253 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 SERPINB6P35237 376 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 CHKAP35790 457 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 FAM78AQ5JUQ0 283 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 CCDC137Q6PK04 289 aaKnown RBP20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 BZW1Q7L1Q6 419 aaKnown RBP20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 CFAP52Q8N1V2 620 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 CPXM2Q8N436 756 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 SLC35B2Q8TB61 432 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 SMARCD2Q92925 531 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 PRICKLE1Q96MT3 831 aaPredicted RBP20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 TMEM248Q9NWD8 314 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 DONSONQ9NYP3 566 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 DTLQ9NZJ0 730 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 CD207Q9UJ71 328 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 ZFP37Q9Y6Q3 630 aaPredicted RBP20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 SZT2Q5T011 3432 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 DOCK4Q8N1I0 1966 aa20.7■□□□□ 0.9
SIGMAR1-202ENST00000353468 NUP210Q8TEM1 1887 aaPredicted RBP20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 GFRA2O00451 464 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 MCF2LO15068 1137 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 MAP3K6O95382 1288 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 KCNJ1P48048 391 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 FNTAP49354 379 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 EIF3EP60228 445 aaKnown RBP20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 RPS24P62847 133 aaKnown RBP20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 BYSLQ13895 437 aaKnown RBP20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 CCDC85BQ15834 202 aaPredicted RBP20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 TTC27Q6P3X3 843 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 LZTR1Q8N653 840 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 RUNDC3BQ96NL0 473 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 POMKQ9H5K3 350 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 RETREG1Q9H6L5 497 aa20.69■□□□□ 0.9
SIGMAR1-202ENST00000353468 VIPR2P41587 438 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 VCPP55072 806 aaKnown RBP20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 TUBB4BP68371 445 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 HABP4Q5JVS0 413 aaKnown RBP20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 TEX35Q5T0J7 233 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 TFAP2DQ7Z6R9 452 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 CIR1Q86X95 450 aaPredicted RBP20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 CCDC105Q8IYK2 499 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 NPWQ8N729 165 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 ATL2Q8NHH9 583 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 NKD2Q969F2 451 aaPredicted RBP20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 TMA16Q96EY4 203 aaKnown RBP20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 NECTIN4Q96NY8 510 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 MYADMQ96S97 322 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 KLC2Q9H0B6 622 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 TRPV4Q9HBA0 871 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 NDFIP2Q9NV92 336 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 TBC1D14Q9P2M4 693 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 PCYOX1Q9UHG3 505 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 AMACRQ9UHK6 382 aa20.68■□□□□ 0.9
SIGMAR1-202ENST00000353468 DRG1Q9Y295 367 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms