RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CHADO15335 359 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CNOT3O75175 753 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ATE1O95260 518 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 F7P08709 466 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 EEF1DP29692 281 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ABCG1P45844 678 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 BCAR1P56945 870 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 NLRP11P59045 1033 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 SNRPFP62306 86 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ZBTB17Q13105 803 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ORC1Q13415 861 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 FGD3Q5JSP0 725 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM198Q66K66 360 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 LRRC8EQ6NSJ5 796 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 GPR180Q86V85 440 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 MAP4K3Q8IVH8 894 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 HACE1Q8IYU2 909 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CPXCR1Q8N123 301 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TMCO5AQ8N6Q1 288 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 SCAIQ8N9R8 606 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ARHGEF1Q92888 912 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 HPS1Q92902 700 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 MXRA8Q9BRK3 442 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 EFHD1Q9BUP0 239 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 DHX35Q9H5Z1 703 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 DHX33Q9H6R0 707 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CYP26B1Q9NR63 512 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 GPATCH2LQ9NWQ4 482 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 NXF1Q9UBU9 619 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TJP2Q9UDY2 1190 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 DCDC2Q9UHG0 476 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 AGO2Q9UKV8 859 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 PADI4Q9UM07 663 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 SLC8A2Q9UPR5 921 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TMA7Q9Y2S6 64 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 MRPL11Q9Y3B7 192 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 WDR27A2RRH5 827 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 SLC15A5A6NIM6 579 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 PLOD2O00469 737 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 CSDE1O75534 798 aaKnown RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 TBXAS1P24557 533 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 MIPP30301 263 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 L1CAMP32004 1257 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ACADVLP49748 655 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 IKBKEQ14164 716 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 KCNJ11Q14654 390 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 PCLAFQ15004 111 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 UGCGQ16739 394 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ZACNQ401N2 412 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 SLC39A4Q6P5W5 647 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 CES3Q6UWW8 571 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 CMC1Q7Z7K0 106 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 MAPK15Q8TD08 544 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 DLG3Q92796 817 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 SLC29A1Q99808 456 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 HIPK3Q9H422 1215 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 RSAD1Q9HA92 442 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 XPNPEP3Q9NQH7 507 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 FAM189A1O60320 539 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 GMNNO75496 209 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 GRAP2O75791 330 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ACO1P21399 889 aaKnown RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 PRDX6P30041 224 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 GRIA1P42261 906 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 PFKPQ01813 784 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 TAP1Q03518 808 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 TFDP2Q14188 446 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ZBED5Q49AG3 693 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 NANOGP8Q6NSW7 305 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 GALNT18Q6P9A2 607 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 DNAJC14Q6Y2X3 702 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM179Q6ZVK1 233 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 CHERPQ8IWX8 916 aaKnown RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 LZTR1Q8N653 840 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 BSNDQ8WZ55 320 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 SCYL1Q96KG9 808 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 AGAP3Q96P47 875 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 SORT1Q99523 831 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 RIT2Q99578 217 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 FRMD8P1Q9BZ68 369 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 CDH19Q9H159 772 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ATAD3AQ9NVI7 634 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 COPG2Q9UBF2 871 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 FAM32AQ9Y421 112 aaKnown RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 DDTLA6NHG4 134 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 WDR46O15213 610 aaKnown RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 TIPRLO75663 272 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 VAPBO95292 243 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 CLIC3O95833 236 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF182P17025 639 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ITGB5P18084 799 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 PRKCHP24723 683 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 ALDH3B2P48448 385 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 RALGDSQ12967 914 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 FAM98CQ17RN3 349 aaKnown RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 AARS2Q5JTZ9 985 aaKnown RBP7.81□□□□□ -1.16
BRCA1-201ENST00000352993 UTS2BQ765I0 119 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 HERC6Q8IVU3 1022 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 FIBCD1Q8N539 461 aa7.81□□□□□ -1.16
BRCA1-201ENST00000352993 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms