RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ZNF394Q53GI3 561 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 FSTL4Q6MZW2 842 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 DRICH1Q6PGQ1 229 aaPredicted RBP8.55□□□□□ -1.04
CD44-205ENST00000352818 DCUN1D2Q6PH85 259 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 LCLAT1Q6UWP7 414 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 LIMS2Q7Z4I7 341 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 TMC3Q7Z5M5 1100 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 UNC93AQ86WB7 457 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 RALGPS2Q86X27 583 aaPredicted RBP8.55□□□□□ -1.04
CD44-205ENST00000352818 RCOR2Q8IZ40 523 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 DEPDC1BQ8WUY9 529 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 C18orf8Q96DM3 657 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 GDAP1L1Q96MZ0 367 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 ZIM3Q96PE6 472 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 MCEEQ96PE7 176 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 TWNKQ96RR1 684 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 FMO2Q99518 471 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 TRIM51Q9BSJ1 452 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 NT5C1AQ9BXI3 368 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 EIF2AQ9BY44 585 aaKnown RBP8.55□□□□□ -1.04
CD44-205ENST00000352818 DCLK3Q9C098 648 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 NEUROG2Q9H2A3 272 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
CD44-205ENST00000352818 GRHL1Q9NZI5 618 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 VPS18Q9P253 973 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 ANKMY1Q9P2S6 941 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 HMGXB4Q9UGU5 601 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 EBF1Q9UH73 591 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 FEZ2Q9UHY8 353 aaPredicted RBP8.55□□□□□ -1.04
CD44-205ENST00000352818 ADAM21Q9UKJ8 722 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 SLC8A2Q9UPR5 921 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 EFR3BQ9Y2G0 817 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 ITPR2Q14571 2701 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 AHCTF1Q8WYP5 2266 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 TCRBV7S2A1N4TA0A589 114 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 FAM170AA1A519 330 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 M0QYV0 167 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 CBFA2T3O75081 653 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 GJB3O75712 270 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 RECQL4O94761 1208 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 DKK1O94907 266 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 SKIP12755 728 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 HSD17B3P37058 310 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 SCNN1AP37088 669 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 EIF2S3P41091 472 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 PTGER3P43115 390 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 GPD2P43304 727 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 GUCY2FP51841 1108 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 NDST1P52848 882 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 CDH8P55286 799 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 RPL7AP62424 266 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 OGDHQ02218 1023 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 SLC25A11Q02978 314 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 CAV1Q03135 178 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 FCHO2Q0JRZ9 810 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 PDCLQ13371 301 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 TRADDQ15628 312 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 UAP1Q16222 522 aaPredicted RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 PKDCCQ504Y2 493 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 C2CD6Q53TS8 623 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 EMC10Q5UCC4 262 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 C9orf57Q5W0N0 161 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 ARHGAP17Q68EM7 881 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 SLC23A3Q6PIS1 610 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 C1orf228Q6PIY5 440 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 ZDHHC24Q6UX98 284 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 XYLT1Q86Y38 959 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 SMG8Q8ND04 991 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 IPO4Q8TEX9 1081 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 ZFYVE19Q96K21 471 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 ZFP42Q96MM3 310 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 ZMAT2Q96NC0 199 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 FAM193BQ96PV7 902 aaPredicted RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 CPXM1Q96SM3 734 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 PAAF1Q9BRP4 392 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 FRMD8P1Q9BZ68 369 aaPredicted RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 OSBPL8Q9BZF1 889 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 TRIM6Q9C030 488 aaPredicted RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 DNAI2Q9GZS0 605 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 NXF3Q9H4D5 531 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 FBRSL1Q9HCM7 1045 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 CYLDQ9NQC7 956 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 TOR4AQ9NXH8 423 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 GDAP2Q9NXN4 497 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 WHRNQ9P202 907 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 KANSL3Q9P2N6 904 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 CYTH4Q9UIA0 394 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 FBN3Q75N90 2809 aa8.54□□□□□ -1.04
CD44-205ENST00000352818 GOLGA4Q13439 2230 aaKnown RBP8.54□□□□□ -1.04
CD44-205ENST00000352818 PTPRBP23467 1997 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 KIF26AQ9ULI4 1882 aaPredicted RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 SCN1AP35498 2009 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 TEX51A0A1B0GUA7 166 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 ARL5CA6NH57 179 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 A6NNZ2 444 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 PIRO00625 290 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 DPYSL4O14531 572 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 NDC80O14777 642 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 CHADO15335 359 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms