RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 MESP2Q0VG99 397 aa14.39□□□□□ -0.11
SEC13-202ENST00000350697 MFN1Q8IWA4 741 aa14.39□□□□□ -0.11
SEC13-202ENST00000350697 ACRBPQ8NEB7 543 aa14.39□□□□□ -0.11
SEC13-202ENST00000350697 CCDC26Q8TAB7 109 aa14.39□□□□□ -0.11
SEC13-202ENST00000350697 IGSF8Q969P0 613 aa14.39□□□□□ -0.11
SEC13-202ENST00000350697 PCSK1NQ9UHG2 260 aa14.39□□□□□ -0.11
SEC13-202ENST00000350697 USP18Q9UMW8 372 aa14.39□□□□□ -0.11
SEC13-202ENST00000350697 REXO2Q9Y3B8 237 aaKnown RBP14.39□□□□□ -0.11
SEC13-202ENST00000350697 IGLV3-10A0A075B6K4 115 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 A0A0A6YYK5 440 aaPredicted RBP14.38□□□□□ -0.11
SEC13-202ENST00000350697 TBC1D3BA6NDS4 549 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 DRGXA6NNA5 263 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 ARHGAP6O43182 974 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 NRDCO43847 1150 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 SRGAP2O75044 1071 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 CLDN11O75508 207 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 LUC7L3O95232 432 aaKnown RBP14.38□□□□□ -0.11
SEC13-202ENST00000350697 DCNP07585 359 aaKnown RBP14.38□□□□□ -0.11
SEC13-202ENST00000350697 ARHGAP25P42331 645 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 TNFRSF4P43489 277 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 VAV2P52735 878 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 CDH18Q13634 790 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 CHST9Q7L1S5 443 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 ANKS1BQ7Z6G8 1248 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 PSTKQ8IV42 348 aaKnown RBP14.38□□□□□ -0.11
SEC13-202ENST00000350697 CCAR2Q8N163 923 aaKnown RBP14.38□□□□□ -0.11
SEC13-202ENST00000350697 TXLNBQ8N3L3 684 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 CARNMT1Q8N4J0 409 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 TMEM105Q8N8V8 129 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 FIBINQ8TAL6 211 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 EZH1Q92800 747 aaPredicted RBP14.38□□□□□ -0.11
SEC13-202ENST00000350697 LRFN3Q9BTN0 628 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 RBM12Q9NTZ6 932 aaKnown RBP14.38□□□□□ -0.11
SEC13-202ENST00000350697 DLGAP2Q9P1A6 1054 aa14.38□□□□□ -0.11
SEC13-202ENST00000350697 PPARGC1AQ9UBK2 798 aaKnown RBP14.38□□□□□ -0.11
SEC13-202ENST00000350697 ATG2BQ96BY7 2078 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 DOCK4Q8N1I0 1966 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 FAM72CH0Y354 149 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 H0Y626 953 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 K7EQS6 105 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 HLA-FP30511 346 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 AVPR2P30518 371 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 L1CAMP32004 1257 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 MAN1A1P33908 653 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 IRAK1P51617 712 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 HADHBP55084 474 aaKnown RBP14.37□□□□□ -0.11
SEC13-202ENST00000350697 CDH4P55283 916 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 MESDQ14696 234 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 HADHQ16836 314 aaKnown RBP14.37□□□□□ -0.11
SEC13-202ENST00000350697 BOLA3Q53S33 107 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 FAM72AQ5TYM5 149 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 MANEALQ5VSG8 457 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 DAB2IPQ5VWQ8 1189 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 FAM72DQ6L9T8 149 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 CYP4V2Q6ZWL3 525 aaPredicted RBP14.37□□□□□ -0.11
SEC13-202ENST00000350697 KIAA1328Q86T90 577 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 FAM72BQ86X60 149 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 CIR1Q86X95 450 aaPredicted RBP14.37□□□□□ -0.11
SEC13-202ENST00000350697 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.37□□□□□ -0.11
SEC13-202ENST00000350697 WFDC5Q8TCV5 224 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 PEBP4Q96S96 227 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 IER2Q9BTL4 223 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 SNRNP25Q9BV90 132 aaKnown RBP14.37□□□□□ -0.11
SEC13-202ENST00000350697 ZYG11BQ9C0D3 744 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 CHRDQ9H2X0 955 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 ABCB8Q9NUT2 735 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 TFR2Q9UP52 801 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 AP4E1Q9UPM8 1137 aa14.37□□□□□ -0.11
SEC13-202ENST00000350697 MYO18AQ92614 2054 aaKnown RBP14.37□□□□□ -0.11
SEC13-202ENST00000350697 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.36□□□□□ -0.11
SEC13-202ENST00000350697 RCCD1A6NED2 376 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 BTNL10A8MVZ5 291 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 PJA2O43164 708 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 CNTN5O94779 1100 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 LRIG2O94898 1065 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 TCF4P15884 667 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 NOP2P46087 812 aaKnown RBP14.36□□□□□ -0.11
SEC13-202ENST00000350697 OXCT1P55809 520 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 SEMA3BQ13214 749 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 ZNF177Q13360 481 aaPredicted RBP14.36□□□□□ -0.11
SEC13-202ENST00000350697 EIF4HQ15056 248 aaKnown RBP14.36□□□□□ -0.11
SEC13-202ENST00000350697 GEN1Q17RS7 908 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 ARTNQ5T4W7 220 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 SFTPA1Q8IWL2 248 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 PYROXD2Q8N2H3 581 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 WFIKKN2Q8TEU8 576 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 TBC1D31Q96DN5 1066 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 EPAS1Q99814 870 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 DESI2Q9BSY9 194 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 MAGEB5Q9BZ81 275 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 DHX35Q9H5Z1 703 aaKnown RBP14.36□□□□□ -0.11
SEC13-202ENST00000350697 RETREG1Q9H6L5 497 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 GPATCH2LQ9NWQ4 482 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 MPP6Q9NZW5 540 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 KIAA1522Q9P206 1035 aaPredicted RBP14.36□□□□□ -0.11
SEC13-202ENST00000350697 GGA2Q9UJY4 613 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 STARD13Q9Y3M8 1113 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 ZNF318Q5VUA4 2279 aa14.36□□□□□ -0.11
SEC13-202ENST00000350697 TMEM110-MUSTN1A8MSY1 372 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms