RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 KRT5P13647 590 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 AKR1B1P15121 316 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 CTRB1P17538 263 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 KLRK1P26718 216 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 NUDT2P50583 147 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 BOLA3Q53S33 107 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 PXDC1Q5TGL8 231 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 CTRB2Q6GPI1 263 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 KRT25Q7Z3Z0 450 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 LARGE2Q8N3Y3 721 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 LILRB1Q8NHL6 650 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 ACMSDQ8TDX5 336 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 ZC3H15Q8WU90 426 aaKnown RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 LRTOMTQ8WZ04 291 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 PGBD4Q96DM1 585 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 BRIP1Q9BX63 1249 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 IL17RBQ9NRM6 502 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 ABI2Q9NYB9 513 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 APEX2Q9UBZ4 518 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 KCNN3Q9UGI6 736 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 DNPEPQ9ULA0 475 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 hCG_2039718K7EN88 272 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 HTRA2O43464 458 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 ASNA1O43681 348 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 PLA2G4BP0C869 781 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 BMP3P12645 472 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 COX4I1P13073 169 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 CKMT2P17540 419 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 EEF1DP29692 281 aaKnown RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 CHRNA5P30532 468 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 PRKAA2P54646 552 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 SLC13A2Q13183 592 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 KLF1Q13351 362 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 HIF1AQ16665 826 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 MTX3Q5HYI7 312 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 PDPK2PQ6A1A2 396 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 ZFP1Q6P2D0 407 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 PLEKHG7Q6ZR37 379 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 KCTD8Q6ZWB6 473 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 MAVSQ7Z434 540 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 RHPN2Q8IUC4 686 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 TMEM126BQ8IUX1 230 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 ASCC1Q8N9N2 400 aaKnown RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 GALNT6Q8NCL4 622 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 FBXO36Q8NEA4 188 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 GIMAP1Q8WWP7 306 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 VCPIP1Q96JH7 1222 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 PSKH2Q96QS6 385 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 FERD3LQ96RJ6 166 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF717Q9BY31 904 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF341Q9BYN7 854 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 FOXP3Q9BZS1 431 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 CLPBQ9H078 707 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 RMND5AQ9H871 391 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 MINPP1Q9UNW1 487 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 JAG2Q9Y219 1238 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 PCM1Q15154 2024 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ARHGEF35A5YM69 484 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 FAM172BPA6NC97 362 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 TRIM64BA6NI03 449 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-203ENST00000349748 M0QX08 132 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 TOM1L1O75674 476 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 SGPL1O95470 568 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 PTPN9P43378 593 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 YAP1P46937 504 aaKnown RBP10.9□□□□□ -0.66
CAPN3-203ENST00000349748 FMO5P49326 533 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 SLC18A2Q05940 514 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 BFSP2Q13515 415 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 DLG2Q15700 870 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ANKRD22Q5VYY1 191 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 LLGL2Q6P1M3 1020 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 C16orf46Q6P387 395 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 BPIFB6Q8NFQ5 453 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 PARVAQ9NVD7 372 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ANAPC7Q9UJX3 599 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 SORCS3Q9UPU3 1222 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 CASZ1Q86V15 1759 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ASTN1O14525 1302 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ERVH48-1M5A8F1 160 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 GAS7O60861 476 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 USP12O75317 370 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 MFN2O95140 757 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 CD58P19256 250 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 L1CAMP32004 1257 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 SLC26A2P50443 739 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 MRPS5P82675 430 aaKnown RBP10.9□□□□□ -0.66
CAPN3-203ENST00000349748 TNK2Q07912 1038 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 NIPAL4Q0D2K0 466 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF846Q147U1 533 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 CLEC16AQ2KHT3 1053 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 DALRD3Q5D0E6 543 aaKnown RBP10.9□□□□□ -0.66
CAPN3-203ENST00000349748 AGAP9Q5VTM2 703 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 IQSEC1Q6DN90 963 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ZCCHC8Q6NZY4 707 aaKnown RBP10.9□□□□□ -0.66
CAPN3-203ENST00000349748 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 CYP20A1Q6UW02 462 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms