RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 LYPLA2O95372 231 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 RALBP11234 206 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 TCEA1P23193 301 aaKnown RBP15.54■□□□□ 0.08
PTBP1-201ENST00000349038 ECE1P42892 770 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 DNASE1L3Q13609 305 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 TEDDM1Q5T9Z0 273 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 Q6ZNX1 250 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 FAM110BQ8TC76 370 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 ZNF606Q8WXB4 792 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 ISOC1Q96CN7 298 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 FBXL18Q96ME1 805 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 CAMKK2Q96RR4 588 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 SEPT10Q9P0V9 454 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
PTBP1-201ENST00000349038 MAN1A2O60476 641 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 NOL3O60936 208 aaKnown RBP15.54■□□□□ 0.08
PTBP1-201ENST00000349038 ZBED1O96006 694 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 CEACAM7Q14002 265 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 DRICH1Q6PGQ1 229 aaPredicted RBP15.54■□□□□ 0.08
PTBP1-201ENST00000349038 AHI1Q8N157 1196 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 CCNYL1Q8N7R7 359 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 CAPSLQ8WWF8 208 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 CAB39LQ9H9S4 337 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 DDX56Q9NY93 547 aaKnown RBP15.54■□□□□ 0.08
PTBP1-201ENST00000349038 BCAP29Q9UHQ4 241 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 MRPL11Q9Y3B7 192 aaKnown RBP15.54■□□□□ 0.08
PTBP1-201ENST00000349038 CORINQ9Y5Q5 1042 aa15.54■□□□□ 0.08
PTBP1-201ENST00000349038 MYH9P35579 1960 aaKnown RBP15.54■□□□□ 0.08
PTBP1-201ENST00000349038 C9JVG2 144 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 APOEP02649 317 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 CHRNGP07510 517 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 KRT19P08727 400 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 RBL1P28749 1068 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 HMOX2P30519 316 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 ARRB2P32121 409 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 PHKA2P46019 1235 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 LIG4P49917 911 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 SLC18A2Q05940 514 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 SLC10A2Q12908 348 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-201ENST00000349038 DLG2Q15700 870 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 ZBTB41Q5SVQ8 909 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 LRRC8EQ6NSJ5 796 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 IFNEQ86WN2 208 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 MAP4K3Q8IVH8 894 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 ABRAQ8N0Z2 381 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 SPATA6LQ8N4H0 392 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 KYQ8NBH2 561 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 BPIFB6Q8NFQ5 453 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 MAML3Q96JK9 1138 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 APBA2Q99767 749 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 SLC39A3Q9BRY0 314 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 CXorf21Q9HAI6 301 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 TMEM216Q9P0N5 145 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 TBX20Q9UMR3 447 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 SCAF8Q9UPN6 1271 aaKnown RBP15.53■□□□□ 0.08
PTBP1-201ENST00000349038 GPC6Q9Y625 555 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-201ENST00000349038 AP3B1O00203 1094 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 GNL1P36915 607 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-201ENST00000349038 LSM3P62310 102 aaKnown RBP15.53■□□□□ 0.08
PTBP1-201ENST00000349038 DMP1Q13316 513 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-201ENST00000349038 BFSP2Q13515 415 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 TEX44Q53QW1 395 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 THOC7Q6I9Y2 204 aaKnown RBP15.53■□□□□ 0.08
PTBP1-201ENST00000349038 DCDC5Q6ZRR9 648 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 ZBTB33Q86T24 672 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 CDR2LQ86X02 465 aaPredicted RBP15.53■□□□□ 0.08
PTBP1-201ENST00000349038 SLC4A11Q8NBS3 891 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 ZNF516Q92618 1163 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 WDR41Q9HAD4 459 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.53■□□□□ 0.082e-9■□□□□ 10.6
PTBP1-201ENST00000349038 FBXO28Q9NVF7 368 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 EXOC7Q9UPT5 735 aa15.53■□□□□ 0.08
PTBP1-201ENST00000349038 ZNF839A8K0R7 811 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 MATN2O00339 956 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 FBXO21O94952 628 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 H6PDO95479 791 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 ITGAVP06756 1048 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 KRT3P12035 628 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 YWHABP31946 246 aaKnown RBP15.52■□□□□ 0.08
PTBP1-201ENST00000349038 EPHX2P34913 555 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 QARSP47897 775 aaKnown RBP15.52■□□□□ 0.08
PTBP1-201ENST00000349038 CYP24A1Q07973 514 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 WASHC5Q12768 1159 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 SPP2Q13103 211 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 AARS2Q5JTZ9 985 aaKnown RBP15.52■□□□□ 0.08
PTBP1-201ENST00000349038 EXOC8Q8IYI6 725 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 TMEM161BQ8NDZ6 487 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 TRIM8Q9BZR9 551 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 NGRNQ9NPE2 291 aaKnown RBP15.52■□□□□ 0.08
PTBP1-201ENST00000349038 TCF7L2Q9NQB0 619 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 GPRC5DQ9NZD1 345 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 WDR46O15213 610 aaKnown RBP15.52■□□□□ 0.08
PTBP1-201ENST00000349038 ENTPD3O75355 529 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 TCF7P36402 384 aaPredicted RBP15.52■□□□□ 0.08
PTBP1-201ENST00000349038 CDK9P50750 372 aaKnown RBP15.52■□□□□ 0.08
PTBP1-201ENST00000349038 YWHAZP63104 245 aaKnown RBP15.52■□□□□ 0.08
PTBP1-201ENST00000349038 UGCGQ16739 394 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 SLC39A4Q6P5W5 647 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 UNC5AQ6ZN44 842 aa15.52■□□□□ 0.08
PTBP1-201ENST00000349038 TAMM41Q96BW9 452 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms