RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 OBP2AQ9NY56 170 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 STIM2Q9P246 746 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 ZFP37Q9Y6Q3 630 aaPredicted RBP27.9■■■□□ 2.06
SSBP4-202ENST00000348495 DOCK4Q8N1I0 1966 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 ZFXP17010 805 aaPredicted RBP27.89■■■□□ 2.06
SSBP4-202ENST00000348495 VIPR2P41587 438 aa27.89■■■□□ 2.06
SSBP4-202ENST00000348495 NLRP14Q86W24 1093 aa27.89■■■□□ 2.06
SSBP4-202ENST00000348495 PRELID2Q8N945 189 aa27.89■■■□□ 2.06
SSBP4-202ENST00000348495 SPATA4Q8NEY3 305 aa27.89■■■□□ 2.06
SSBP4-202ENST00000348495 ZYG11BQ9C0D3 744 aa27.89■■■□□ 2.06
SSBP4-202ENST00000348495 MPP6Q9NZW5 540 aa27.89■■■□□ 2.06
SSBP4-202ENST00000348495 ZNF212Q9UDV6 495 aa27.89■■■□□ 2.06
SSBP4-202ENST00000348495 R3HDM2Q9Y2K5 976 aaKnown RBP27.89■■■□□ 2.06
SSBP4-202ENST00000348495 MFHAS1Q9Y4C4 1052 aa27.89■■■□□ 2.06
SSBP4-202ENST00000348495 WASH4PA8MWX3 477 aa27.89■■■□□ 2.05
SSBP4-202ENST00000348495 KRIT1O00522 736 aa27.89■■■□□ 2.05
SSBP4-202ENST00000348495 LAMP2P13473 410 aa27.89■■■□□ 2.05
SSBP4-202ENST00000348495 ALFQ53S48 1182 aa27.89■■■□□ 2.05
SSBP4-202ENST00000348495 RPRD1AQ96P16 312 aaPredicted RBP27.89■■■□□ 2.05
SSBP4-202ENST00000348495 CATSPERBQ9H7T0 1116 aa27.89■■■□□ 2.05
SSBP4-202ENST00000348495 APOC4-APOC2K7ER74 178 aa27.88■■■□□ 2.05
SSBP4-202ENST00000348495 APOC2P02655 101 aa27.88■■■□□ 2.05
SSBP4-202ENST00000348495 RHOQP17081 205 aa27.88■■■□□ 2.05
SSBP4-202ENST00000348495 TGM2P21980 687 aa27.88■■■□□ 2.05
SSBP4-202ENST00000348495 SMAD4Q13485 552 aaKnown RBP27.88■■■□□ 2.05
SSBP4-202ENST00000348495 PAFAH1B3Q15102 231 aaKnown RBP27.88■■■□□ 2.05
SSBP4-202ENST00000348495 CEP112Q8N8E3 955 aa27.88■■■□□ 2.05
SSBP4-202ENST00000348495 CARD6Q9BX69 1037 aa27.88■■■□□ 2.05
SSBP4-202ENST00000348495 TRDMT1O14717 391 aaKnown RBP27.87■■■□□ 2.05
SSBP4-202ENST00000348495 CNTN5O94779 1100 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 PECAM1P16284 738 aaPredicted RBP27.87■■■□□ 2.05
SSBP4-202ENST00000348495 CHKAP35790 457 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 SGSHP51688 502 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 SKIV2LQ15477 1246 aaKnown RBP27.87■■■□□ 2.05
SSBP4-202ENST00000348495 RTL3Q8N8U3 475 aaKnown RBP27.87■■■□□ 2.05
SSBP4-202ENST00000348495 MNS1Q8NEH6 495 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 KLC2Q9H0B6 622 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 TBC1D14Q9P2M4 693 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 SAE1Q9UBE0 346 aaPredicted RBP27.87■■■□□ 2.05
SSBP4-202ENST00000348495 MBTPS2O43462 519 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 GBP2P32456 591 aaPredicted RBP27.87■■■□□ 2.05
SSBP4-202ENST00000348495 RPS24P62847 133 aaKnown RBP27.87■■■□□ 2.05
SSBP4-202ENST00000348495 CYP1B1Q16678 543 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 RABGAP1LQ5R372 815 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 TMCO3Q6UWJ1 677 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 PPM1EQ8WY54 764 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 HLA-CQ95604 372 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 RETREG1Q9H6L5 497 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 RBM12Q9NTZ6 932 aaKnown RBP27.87■■■□□ 2.05
SSBP4-202ENST00000348495 TMEM248Q9NWD8 314 aa27.87■■■□□ 2.05
SSBP4-202ENST00000348495 XIRP2A4UGR9 3374 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 VCPP55072 806 aaKnown RBP27.86■■■□□ 2.05
SSBP4-202ENST00000348495 GBE1Q04446 702 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 TANGO2Q6ICL3 276 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 NPNTQ6UXI9 565 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 CFAP52Q8N1V2 620 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 NPWQ8N729 165 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 TTC13Q8NBP0 860 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 ACTL9Q8TC94 416 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 OTUB2Q96DC9 234 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 P2RY11Q96G91 374 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 ZFP14Q9HCL3 533 aa27.86■■■□□ 2.05
SSBP4-202ENST00000348495 HEPACAM2A8MVW5 462 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 NR2C2P49116 596 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 SLC10A2Q12908 348 aaPredicted RBP27.85■■■□□ 2.05
SSBP4-202ENST00000348495 TTC39BQ5VTQ0 682 aaPredicted RBP27.85■■■□□ 2.05
SSBP4-202ENST00000348495 C1orf228Q6PIY5 440 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 C12orf50Q8NA57 414 aaPredicted RBP27.85■■■□□ 2.05
SSBP4-202ENST00000348495 BPIFB1Q8TDL5 484 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 C1orf54Q8WWF1 131 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 E2F7Q96AV8 911 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 HAUS1Q96CS2 278 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 RPGRIP1Q96KN7 1286 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 LINC00597Q9H2U6 94 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 NDFIP2Q9NV92 336 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 EPS15L1Q9UBC2 864 aa27.85■■■□□ 2.05
SSBP4-202ENST00000348495 EYSQ5T1H1 3165 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 GOLGA6L10A0A0M3HER8 536 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 CTAGE15A4D2H0 777 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 CCDC188H7C350 402 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 MFSD11O43934 449 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 TSPAN3O60637 253 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 CTAGE8P0CG41 777 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 OTUD4Q01804 1114 aaKnown RBP27.84■■■□□ 2.05
SSBP4-202ENST00000348495 CCNG2Q16589 344 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 OTOP3Q7RTS5 596 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 CTAGE6Q86UF2 777 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 CIR1Q86X95 450 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-202ENST00000348495 CTAGE4Q8IX94 777 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 TDRD5Q8NAT2 981 aaKnown RBP27.84■■■□□ 2.05
SSBP4-202ENST00000348495 HJURPQ8NCD3 748 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-202ENST00000348495 ATG4AQ8WYN0 398 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 P3H4Q92791 437 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 LRRC19Q9H756 370 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 DTLQ9NZJ0 730 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 KIF26AQ9ULI4 1882 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-202ENST00000348495 C5orf42Q9H799 3197 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 SLC9A3R1O14745 358 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-202ENST00000348495 CDH4P55283 916 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 NOMO1Q15155 1222 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms