RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 MAGEA8P43361 318 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 PTPN9P43378 593 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 RAB15P59190 212 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 STXBP2Q15833 593 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 MYLK3Q32MK0 819 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 SNRNP48Q6IEG0 339 aaKnown RBP18.65■□□□□ 0.58
KRCC1-201ENST00000347055 ERI1Q8IV48 349 aaKnown RBP18.65■□□□□ 0.58
KRCC1-201ENST00000347055 ZFP28Q8NHY6 868 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 PRPF31Q8WWY3 499 aaKnown RBP18.65■□□□□ 0.58
KRCC1-201ENST00000347055 RPF1Q9H9Y2 349 aaKnown RBP18.65■□□□□ 0.58
KRCC1-201ENST00000347055 TMEM216Q9P0N5 145 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 BTBD7Q9P203 1132 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 SIX4Q9UIU6 781 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 BARX2Q9UMQ3 279 aaPredicted RBP18.65■□□□□ 0.58
KRCC1-201ENST00000347055 RIPK3Q9Y572 518 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 AK5Q9Y6K8 562 aa18.65■□□□□ 0.58
KRCC1-201ENST00000347055 WDR27A2RRH5 827 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 ACKR2O00590 384 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 HNRNPRO43390 633 aaKnown RBP18.64■□□□□ 0.57
KRCC1-201ENST00000347055 CDK4P11802 303 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 ZNF23P17027 643 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 SPRP35270 261 aaPredicted RBP18.64■□□□□ 0.57
KRCC1-201ENST00000347055 RAP1GAPP47736 663 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 TUBA4AP68366 448 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 C15orf59Q2T9L4 293 aaPredicted RBP18.64■□□□□ 0.57
KRCC1-201ENST00000347055 DHRS4L2Q6PKH6 230 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 SEPT12Q8IYM1 358 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 CNTD1Q8N815 330 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 GAB3Q8WWW8 586 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 ZNF385DQ9H6B1 395 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 RLFQ13129 1914 aa18.64■□□□□ 0.57
KRCC1-201ENST00000347055 COL11A1P12107 1806 aaPredicted RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 TRIM13O60858 407 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 TRMUO75648 421 aaKnown RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 SORBS2O94875 1100 aaKnown RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 TOP3BO95985 862 aaKnown RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 POLBP06746 335 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 ME2P23368 584 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 ARRB2P32121 409 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 PSMD8P48556 350 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 NUDT2P50583 147 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 TXNL4AP83876 142 aaKnown RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 PRKG1Q13976 671 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 KYAT1Q16773 422 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 SH3PXD2AQ5TCZ1 1133 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 OLFML1Q6UWY5 402 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 UNC5BQ8IZJ1 945 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 DSELQ8IZU8 1212 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 HIPK4Q8NE63 616 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 HTR3CQ8WXA8 447 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 C12orf42Q96LP6 360 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 LENG8Q96PV6 779 aaPredicted RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 TWNKQ96RR1 684 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 TRIM56Q9BRZ2 755 aaKnown RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 ILKAPQ9H0C8 392 aaPredicted RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 MTMR10Q9NXD2 777 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 GNEQ9Y223 722 aaKnown RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 RAP2CQ9Y3L5 183 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 A0A0J9YVX5 310 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 LOC100653049A0A140TA62 436 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 MATN2O00339 956 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 HDAC3O15379 428 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 ZSCAN9O15535 394 aaPredicted RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 DGKIO75912 1065 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 KRT34O76011 436 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 PPARGP37231 505 aaPredicted RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 LIMK2P53671 638 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 SLC6A3Q01959 620 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 ATF7IP2Q5U623 682 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 CLEC14AQ86T13 490 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 TDRD5Q8NAT2 981 aaKnown RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 AKT1S1Q96B36 256 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 RBBP8Q99708 897 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 GRIP2Q9C0E4 1043 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 FZD8Q9H461 694 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 SNX15Q9NRS6 342 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 EPS15L1Q9UBC2 864 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 ZNF214Q9UL59 606 aaPredicted RBP18.63■□□□□ 0.57
KRCC1-201ENST00000347055 TNFSF13BQ9Y275 285 aa18.63■□□□□ 0.57
KRCC1-201ENST00000347055 DOCK1Q14185 1865 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 IGKV6-21A0A0C4DH24 114 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 CCDC160A6NGH7 325 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 KRT19P08727 400 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 CDH2P19022 906 aaPredicted RBP18.62■□□□□ 0.57
KRCC1-201ENST00000347055 HSPA1LP34931 641 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 CDK9P50750 372 aaKnown RBP18.62■□□□□ 0.57
KRCC1-201ENST00000347055 SP2Q02086 613 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 LAMTOR4Q0VGL1 99 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 MTMR2Q13614 643 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 KCNT2Q6UVM3 1135 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 PSTKQ8IV42 348 aaKnown RBP18.62■□□□□ 0.57
KRCC1-201ENST00000347055 C1orf127Q8N9H9 656 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 RIN3Q8TB24 985 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 PDCD6IPQ8WUM4 868 aaKnown RBP18.62■□□□□ 0.57
KRCC1-201ENST00000347055 ARNTL2Q8WYA1 636 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 CERS2Q96G23 380 aa18.62■□□□□ 0.57
KRCC1-201ENST00000347055 HEXIM2Q96MH2 286 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms