RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SUPT3HB4E1H0 165 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 LGR5O75473 907 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 DNAJC8O75937 253 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 KCNA3P22001 575 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 NUMBP49757 651 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ASTE1Q2TB18 679 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 SLFN11Q7Z7L1 901 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 AMIGO3Q86WK7 504 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 LZTR1Q8N653 840 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 RMDN2Q96LZ7 410 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ADA2Q9NZK5 511 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 SPASTQ9UBP0 616 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ROBO3Q96MS0 1386 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 DUOX1Q9NRD9 1551 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 SNRPAP09012 282 aaKnown RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 SNRPD1P62314 119 aaKnown RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 KLC1Q07866 573 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 CEP70Q8NHQ1 597 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 TCP10LQ8TDR4 215 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ABTB1Q969K4 478 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 BRD8Q9H0E9 1235 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 RNF19AQ9NV58 838 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ARMCX1Q9P291 453 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 COL1A2P08123 1366 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 SNX3O60493 162 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 TCN1P20061 433 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ADRA1DP25100 572 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 FDFT1P37268 417 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 PTGER2P43116 358 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 BCL2L1Q07817 233 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 TTC27Q6P3X3 843 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 USP45Q70EL2 814 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 PLPPR4Q7Z2D5 763 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 BLOC1S5Q8TDH9 187 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 AGAP11Q8TF27 550 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 OR8D1Q8WZ84 308 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 TMEM120AQ9BXJ8 343 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 CEP41Q9BYV8 373 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 RIC8BQ9NVN3 520 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 RPS6KB2Q9UBS0 482 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 hCG_2014768A0A024R1R8 64 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 CACNB4O00305 520 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 SERPINF2P08697 491 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 MAPTP10636 758 aaKnown RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 AKAP5P24588 427 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 SERPINB9P50453 376 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 SCNN1GP51170 649 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 PFKPQ01813 784 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 SULT2A1Q06520 285 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 TCEA2Q15560 299 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 TTC39BQ5VTQ0 682 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 GRAMD4Q6IC98 578 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 DENND5BQ6ZUT9 1274 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 FAM71AQ8IYT1 594 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 TRAPPC12Q8WVT3 735 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 KREMEN1Q96MU8 473 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 YY1AP1Q9H869 796 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 GRIN2DO15399 1336 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 H3BM21 787 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 FGFR1P11362 822 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 SOX11P35716 441 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 RTP1P59025 263 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 ZC3H12BQ5HYM0 836 aaKnown RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 SLCO1B3Q9NPD5 702 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 PCYOX1Q9UHG3 505 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 DNALI1O14645 258 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 GCATO75600 419 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 POLBP06746 335 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 CXCL8P10145 99 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 PAX7P23759 505 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 EFTUD2Q15029 972 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■■■□ 24.5
CLCN6-202ENST00000346436 TMEM164Q5U3C3 297 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 SLC24A5Q71RS6 500 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 B3GALNT2Q8NCR0 500 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 ARHGAP9Q9BRR9 750 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 FOXP3Q9BZS1 431 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 ABI3Q9P2A4 366 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 MTO1Q9Y2Z2 717 aaKnown RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 INSL6Q9Y581 213 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 LRRC72A6NJI9 287 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 A8MUI8 341 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 INPP4BO15327 924 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 UBA1P22314 1058 aaKnown RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 MAPK1P28482 360 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 CD52P31358 61 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 TAS2R40P59535 323 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 RPL7AP62424 266 aaKnown RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 SRSF11Q05519 484 aaKnown RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 KCNA10Q16322 511 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 KRT80Q6KB66 452 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 HJURPQ8NCD3 748 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 ZNF248Q8NDW4 579 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 ART4Q93070 314 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 KIF17Q9P2E2 1029 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 DEC1Q9P2X7 70 aa11.13□□□□□ -0.63
CLCN6-202ENST00000346436 R3HDM2Q9Y2K5 976 aaKnown RBP11.13□□□□□ -0.63
CLCN6-202ENST00000346436 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms