RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PAQR9Q6ZVX9 377 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 SYDE1Q6ZW31 735 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 PIGZQ86VD9 579 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 ARID3BQ8IVW6 561 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 ARFGAP1Q8N6T3 406 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 GAB3Q8WWW8 586 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 RNF25Q96BH1 459 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 SMARCD1Q96GM5 515 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 OXCT2Q9BYC2 517 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 B3GNT5Q9BYG0 378 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 FAM129AQ9BZQ8 928 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 DCLK3Q9C098 648 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 CRISPLD1Q9H336 500 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 RXFP3Q9NSD7 469 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 FAM53CQ9NYF3 392 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 GTSE1Q9NYZ3 720 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 OGFRQ9NZT2 677 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 MYO18AQ92614 2054 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 ESYT3A0FGR9 886 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 HSF2BPO75031 334 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 DAB1O75553 588 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 AP1G2O75843 785 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 SASH3O75995 380 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 OAZ2O95190 189 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 ECEL1O95672 775 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 LCP1P13796 627 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 WEE1P30291 646 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 MIPP30301 263 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 CDKN2BP42772 138 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 DRG2P55039 364 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 TSPY1Q01534 308 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 YWHAHQ04917 246 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 CCNG2Q16589 344 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 TAZQ16635 292 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 CCDC14Q49A88 953 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 ATP13A4Q4VNC1 1196 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 PLA2G2CQ5R387 149 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 TTC27Q6P3X3 843 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 GAREM2Q75VX8 874 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 SCUBE3Q8IX30 993 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 TEKT4Q8WW24 435 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 IFT81Q8WYA0 676 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 PCED1BQ96HM7 432 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 TBCBQ99426 244 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 ERP44Q9BS26 406 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 HERPUD2Q9BSE4 406 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 TRIM51Q9BSJ1 452 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 UBXN6Q9BZV1 441 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 ZWILCHQ9H900 591 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 LRRC4Q9HBW1 653 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 KLHL11Q9NVR0 708 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 NFU1Q9UMS0 254 aa13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 TIMM13Q9Y5L4 95 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-202ENST00000344114 CLDN5O00501 218 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 PRPSAP2O60256 369 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 GRAP2O75791 330 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 OR4Q2P0C623 313 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 IL1R2P27930 398 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 EPHB3P54753 998 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 ADIGQ0VDE8 80 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 GPS2Q13227 327 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 GPR17Q13304 367 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 HLTFQ14527 1009 aaKnown RBP eCLIP13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 STPG1Q5TH74 334 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 DUPD1Q68J44 220 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 TXNRD3NBQ6F5E7 133 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 FAM171BQ6P995 826 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 SND1Q7KZF4 910 aaKnown RBP eCLIP13.96□□□□□ -0.174e-8■■■□□ 18
HERPUD1-202ENST00000344114 VSIG1Q86XK7 387 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 KRT222Q8N1A0 295 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 SIX6OS1Q8N1H7 587 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 MREGQ8N565 214 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 TTC8Q8TAM2 541 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 FAM172AQ8WUF8 416 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 RAPGEF5Q92565 580 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 MYLPFQ96A32 169 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 ZFYVE19Q96K21 471 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 PKMYT1Q99640 499 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 FRMD8P1Q9BZ68 369 aaPredicted RBP13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 ASB3Q9Y575 518 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 PCDHGA5Q9Y5G8 931 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 KIAA1549LQ6ZVL6 1849 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 NUP205Q92621 2012 aa13.96□□□□□ -0.17
HERPUD1-202ENST00000344114 C3orf70A6NLC5 250 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 MDM4O15151 490 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 RPP40O75818 363 aaKnown RBP13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 KCNK5O95279 499 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 GAS8O95995 478 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 PROS1P07225 676 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 KDELR1P24390 212 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 MAP3K7CLP57077 242 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 DUSP4Q13115 394 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 CCDC6Q16204 474 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 CDO1Q16878 200 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 CCDC142Q17RM4 750 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 C15orf59Q2T9L4 293 aaPredicted RBP13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 SMTNL2Q2TAL5 461 aa13.96□□□□□ -0.18
HERPUD1-202ENST00000344114 BOLA3Q53S33 107 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms