RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TRIM42Q8IWZ5 723 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 HACE1Q8IYU2 909 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 NPWQ8N729 165 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 GSTCDQ8NEC7 633 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 KCTD13Q8WZ19 329 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 NUDCD1Q96RS6 583 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 APOL2Q9BQE5 337 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 ZFATQ9P243 1243 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 LNPEPQ9UIQ6 1025 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 GYG2O15488 501 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 ESRRAP11474 423 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 MLNP12872 115 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 ABCG1P45844 678 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 OCRLQ01968 901 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 RCN2Q14257 317 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 HSF5Q4G112 596 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 MARK2Q7KZI7 788 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 CRLF3Q8IUI8 442 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 KIRREL3Q8IZU9 778 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 ZMIZ2Q8NF64 920 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 HASPINQ8TF76 798 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 KATNAL1Q9BW62 490 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 WDR6Q9NNW5 1121 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 FAM105AQ9NUU6 356 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 TXNDC16Q9P2K2 825 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 M0QZ92 97 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 TRAFD1O14545 582 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 CCDC22O60826 627 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 THP07101 528 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 GNAT1P11488 350 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 STX3Q13277 289 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 PDE1CQ14123 709 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 PAFAH1B3Q15102 231 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 FASTKD1Q53R41 847 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 DNAAF3Q8N9W5 541 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 C7orf26Q96N11 449 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 RILPQ96NA2 401 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 BTBD10Q9BSF8 475 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 MKS1Q9NXB0 559 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 UBP1Q9NZI7 540 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 CCDC78A2IDD5 438 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 WFS1O76024 890 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 ALDH1A2O94788 518 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 ENO1P06733 434 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 PTPN3P26045 913 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 MRPS6P82932 125 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 SPDYAQ5MJ70 313 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 CXCL17Q6UXB2 119 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 BNIPLQ7Z465 357 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 APBB2Q92870 758 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 AZIN2Q96A70 460 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 ZNF669Q96BR6 464 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 FCRL3Q96P31 734 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 RNPEPL1Q9HAU8 725 aa15.28■□□□□ 0.04
VIPAS39-202ENST00000343765 DNAJC6O75061 913 aa15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 LTFP02788 710 aa15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 ITGA2BP08514 1039 aa15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 ALDH18A1P54886 795 aaKnown RBP15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 CMC1Q7Z7K0 106 aa15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 MCUR1Q96AQ8 359 aa15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 CELF6Q96J87 481 aaKnown RBP15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 EIF2B3Q9NR50 452 aaKnown RBP15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 EMCNQ9ULC0 261 aa15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 HBS1LQ9Y450 684 aaKnown RBP15.27■□□□□ 0.04
VIPAS39-202ENST00000343765 ARL5CA6NH57 179 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 ZBTB24O43167 697 aaPredicted RBP15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 ITM2AO43736 263 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 ATP9BO43861 1147 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 POLBP06746 335 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 ELF1P32519 619 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 HUNKP57058 714 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 GNASQ5JWF2 1037 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 GORASP1Q9BQQ3 440 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 EBF4Q9BQW3 602 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 KCNK4Q9NYG8 393 aa15.27■□□□□ 0.03
VIPAS39-202ENST00000343765 CALB2P22676 271 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 FKBP1BP68106 108 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 TLDC1Q6P9B6 456 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 TREML1Q86YW5 311 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 RNF34Q969K3 372 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 CERS2Q96G23 380 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 ZNF570Q96NI8 536 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 TSPAN18Q96SJ8 248 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 TKTL2Q9H0I9 626 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 SLC38A7Q9NVC3 462 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 ZNF358Q9NW07 568 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 FBXW11Q9UKB1 542 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 FBXO21O94952 628 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 PGK1P00558 417 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 POMCP01189 267 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 IL1BP01584 269 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 CNTFP26441 200 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 TYK2P29597 1187 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 LHX1P48742 406 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 SESN3P58005 492 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 KDSRQ06136 332 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 ZBTB17Q13105 803 aa15.26■□□□□ 0.03
VIPAS39-202ENST00000343765 TIFABQ6ZNK6 161 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms