RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CPA5Q8WXQ8 436 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 ERP44Q9BS26 406 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 SRP68Q9UHB9 627 aaKnown RBP17.97■□□□□ 0.47
SMAD4-201ENST00000342988 NAGPAQ9UK23 515 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 RENBPP51606 427 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 RRN3Q9NYV6 651 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 MFHAS1Q9Y4C4 1052 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 SYNMO15061 1565 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 ATF4P18848 351 aaPredicted RBP17.97■□□□□ 0.47
SMAD4-201ENST00000342988 PBLDP30039 288 aaPredicted RBP17.97■□□□□ 0.47
SMAD4-201ENST00000342988 HNRNPH1P31943 449 aaKnown RBP17.97■□□□□ 0.47
SMAD4-201ENST00000342988 WDR59Q6PJI9 974 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 RAPGEFL1Q9UHV5 662 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 AFF2P51816 1311 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 APOL3O95236 402 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 ZFP69Q49AA0 526 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 TMEM159Q96B96 161 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 PIF1Q9H611 641 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 A1CFQ9NQ94 594 aaKnown RBP17.97■□□□□ 0.47
SMAD4-201ENST00000342988 HAO1Q9UJM8 370 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 HSD17B3P37058 310 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 MFSD7Q6UXD7 560 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 CHST12Q9NRB3 414 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 CDH9Q9ULB4 789 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 RCAN1P53805 252 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 FAM111AQ96PZ2 611 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 A0A1W2PP64 1363 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 PRLRP16471 622 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 PTGS2P35354 604 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 LACTB2Q53H82 288 aaPredicted RBP17.96■□□□□ 0.47
SMAD4-201ENST00000342988 DHRSXQ8N5I4 330 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 THG1LQ9NWX6 298 aaKnown RBP17.96■□□□□ 0.47
SMAD4-201ENST00000342988 PTGFRNQ9P2B2 879 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 DSEQ9UL01 958 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 TAF5Q15542 800 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 TNFAIP8L1Q8WVP5 186 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 TCF7L2Q9NQB0 619 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 AKAP8O43823 692 aaKnown RBP17.96■□□□□ 0.47
SMAD4-201ENST00000342988 ITGA8P53708 1063 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 PDK2Q15119 407 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 TUBA3EQ6PEY2 450 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 ELOA2Q8IYF1 753 aaPredicted RBP17.96■□□□□ 0.47
SMAD4-201ENST00000342988 DEFB107AQ8IZN7 70 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 C7orf25Q9BPX7 421 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 DCUN1D5Q9BTE7 237 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 SLC6A15Q9H2J7 730 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 CYP26A1O43174 497 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 CYP2C8P10632 490 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 CCNCP24863 283 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 QSOX2Q6ZRP7 698 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 STRA8Q7Z7C7 330 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 SRFBP1Q8NEF9 429 aaKnown RBP17.96■□□□□ 0.47
SMAD4-201ENST00000342988 GDPD5Q8WTR4 605 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 SLC39A8Q9C0K1 460 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 TMEM117Q9H0C3 514 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 PIK3CBP42338 1070 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 USP41Q3LFD5 358 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 DGCR6LQ9BY27 220 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 LRRC40Q9H9A6 602 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 MRPS7Q9Y2R9 242 aaKnown RBP17.96■□□□□ 0.47
SMAD4-201ENST00000342988 SNAPC5O75971 98 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 OR5F1O95221 314 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 KCNA10Q16322 511 aa17.96■□□□□ 0.47
SMAD4-201ENST00000342988 G2E3Q7L622 706 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 GATAD2BQ8WXI9 593 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 CYP3A43Q9HB55 503 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 PCDHA10Q9Y5I2 948 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 CHST10O43529 356 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 CRABP2P29373 138 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 TEX47Q8TBZ9 253 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 MED11Q9P086 117 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 REM1O75628 298 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 FSHRP23945 695 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 NAA20P61599 178 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 ATG9AQ7Z3C6 839 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 FAM71DQ8N9W8 422 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 GTF3C2Q8WUA4 911 aaPredicted RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 PHF10Q8WUB8 498 aaKnown RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 LRRC1Q9BTT6 524 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 PDXKO00764 312 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 SERPINF2P08697 491 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 MSLNQ13421 630 aaPredicted RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 RIPOR1Q6ZS17 1223 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 ARMC8Q8IUR7 673 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 RNF145Q96MT1 663 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 ZNF184Q99676 751 aaPredicted RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 ACE2Q9BYF1 805 aaPredicted RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 IGFALSP35858 605 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 NME5P56597 212 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 SPACA7Q96KW9 195 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 THRBP10828 461 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 FASTKQ14296 549 aaKnown RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 NOL9Q5SY16 702 aaKnown RBP17.95■□□□□ 0.46
SMAD4-201ENST00000342988 PAGE2Q7Z2X7 111 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 TNFSF13BQ9Y275 285 aa17.95■□□□□ 0.46
SMAD4-201ENST00000342988 LSM1O15116 133 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms