RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ARHGEF19Q8IW93 802 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 CACTIN-AS1Q8N1I8 211 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 LSMEM1Q8N8F7 131 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 TRUB1Q8WWH5 349 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 BRI3BPQ8WY22 251 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 POLR3FQ9H1D9 316 aaPredicted RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 SSU72Q9NP77 194 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 ZNF302Q9NR11 478 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 PDLIM7Q9NR12 457 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 RBPJLQ9UBG7 517 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 POLIQ9UNA4 740 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 SATB2Q9UPW6 733 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 B3GNT3Q9Y2A9 372 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 ARID2Q68CP9 1835 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 ZNF701M0R085 212 aaPredicted RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 B4GALT4O60513 344 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 KLHL41O60662 606 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 DGAT1O75907 488 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 MYO1DO94832 1006 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 FYNP06241 537 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 C8BP07358 591 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 MAGEA4P43358 317 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 CAV1Q03135 178 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 BNIP3Q12983 259 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 EIF2B5Q13144 721 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 ALCAMQ13740 583 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 LLGL1Q15334 1064 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 SNRNP35Q16560 246 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 NOP9Q86U38 636 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 CHERPQ8IWX8 916 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 MYO1HQ8N1T3 1032 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 CAPSLQ8WWF8 208 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 GIMAP1Q8WWP7 306 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 KAT5Q92993 513 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 MRRFQ96E11 262 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 TCF12Q99081 682 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 MROQ9BYG7 248 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 ST6GALNAC4Q9H4F1 302 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 TOPORSQ9NS56 1045 aaPredicted RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.16□□□□□ -0.46
RTN3-203ENST00000341307 TBC1D14Q9P2M4 693 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 APEX2Q9UBZ4 518 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 ZMAT5Q9UDW3 170 aaKnown RBP12.16□□□□□ -0.46
RTN3-203ENST00000341307 PSMD13Q9UNM6 376 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 CPQQ9Y646 472 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 A0A0G2JMZ2 1700 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 A0A1W2PPW3 197 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 ARIH2O95376 493 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 CYP2C8P10632 490 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 TAS1R3Q7RTX0 852 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 LYSMD3Q7Z3D4 306 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 UBE2Q1Q7Z7E8 422 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 CPNE8Q86YQ8 564 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 MAP4K3Q8IVH8 894 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 PCYT2Q99447 389 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 TP63Q9H3D4 680 aaPredicted RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 RPF2Q9H7B2 306 aaKnown RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 C6orf203Q9P0P8 240 aaPredicted RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 CCL15-CCL14A0A0B4J2E2 113 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 GSTTP1A0A1W2PQM5 241 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 HNRNPDLO14979 420 aaKnown RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 SOX5P35711 763 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 STAT1P42224 750 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 TPTEP56180 551 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 CHRNEQ04844 493 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 UBAP2LQ14157 1087 aaKnown RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 EMC2Q15006 297 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 CCL15Q16663 113 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 FGD3Q5JSP0 725 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 TCHHL1Q5QJ38 904 aaPredicted RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 AGAP7PQ5VUJ5 663 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 ANKRD26P1Q6NSI1 321 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 C11orf63Q6NUN7 778 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 RNF19BQ6ZMZ0 732 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 ZBTB46Q86UZ6 589 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 IGFN1Q86VF2 1251 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 EFCAB3Q8N7B9 438 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 ADAMTS16Q8TE57 1224 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 ALPK1Q96QP1 1244 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 SYT11Q9BT88 431 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 TMEM117Q9H0C3 514 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 CHST7Q9NS84 486 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 ANKMY1Q9P2S6 941 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 FBXO40Q9UH90 709 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 CDH22Q9UJ99 828 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 GTF3C4Q9UKN8 822 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 AGTPBP1Q9UPW5 1226 aa12.15□□□□□ -0.46
RTN3-203ENST00000341307 MAFBQ9Y5Q3 323 aaPredicted RBP12.15□□□□□ -0.46
RTN3-203ENST00000341307 H3BMQ9 156 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 H3BNH8 94 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 KPNA4O00629 521 aaPredicted RBP12.14□□□□□ -0.47
RTN3-203ENST00000341307 ZC3H11AO75152 810 aaKnown RBP eCLIP12.14□□□□□ -0.471e-7■■■■□ 20.8
RTN3-203ENST00000341307 H6PDO95479 791 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 ATF2P15336 505 aa12.14□□□□□ -0.47
RTN3-203ENST00000341307 PRKCAP17252 672 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms