RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 DPEP3Q9H4B8 488 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 DHX35Q9H5Z1 703 aaKnown RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 CRTAC1Q9NQ79 661 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 THAP1Q9NVV9 213 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 TMEM45AQ9NWC5 275 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 CLIC5Q9NZA1 410 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 SCML2Q9UQR0 700 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 APOBEC2Q9Y235 224 aaKnown RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 TCRBV7S3A2A0A539 114 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 PPEF2O14830 753 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 HOXA2O43364 376 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 PEX10O60683 326 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 VAV1P15498 845 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 NUMBP49757 651 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 MNAT1P51948 309 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 RAP1GDS1P52306 607 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 ADIGQ0VDE8 80 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 HIC1Q14526 733 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 SLC1A5Q15758 541 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 CA9Q16790 459 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 KBTBD12Q3ZCT8 623 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 IRAK1BP1Q5VVH5 260 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 DAB2IPQ5VWQ8 1189 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 PDPK2PQ6A1A2 396 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 ALG1LQ6GMV1 187 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 POTEHQ6S545 545 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 TRMT1LQ7Z2T5 733 aaKnown RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 TCP10LQ8TDR4 215 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 PDCD6IPQ8WUM4 868 aaKnown RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 TMEM40Q8WWA1 233 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 PTCD3Q96EY7 689 aaKnown RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 SAGE1Q9NXZ1 904 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 DDX43Q9NXZ2 648 aaKnown RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 CHD5Q8TDI0 1954 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 IGLV3-10A0A075B6K4 115 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 UBOX5O94941 541 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 HARS2P49590 506 aaKnown RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 LIMK2P53671 638 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 RING1Q06587 406 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 IFRD2Q12894 506 aaPredicted RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 MMRN1Q13201 1228 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 TAF5Q15542 800 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 NFE2Q16621 373 aaPredicted RBP7.31□□□□□ -1.24
FCF1-201ENST00000341162 CTC1Q2NKJ3 1217 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 DNAL1Q4LDG9 190 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 CCDC185Q8N715 623 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 C12orf29Q8N999 325 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 SERPINB11Q96P15 392 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 SMOQ99835 787 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 FBXO44Q9H4M3 255 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 POPDC3Q9HBV1 291 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 ATP13A1Q9HD20 1204 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 VPS45Q9NRW7 570 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 KRT82Q9NSB4 513 aa7.31□□□□□ -1.24
FCF1-201ENST00000341162 POC1B-GALNT4F8VUJ3 575 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 RNF103O00237 685 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 MFSD11O43934 449 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 LATS1O95835 1130 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 RARBP10826 455 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 CES1P23141 567 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 SPRP35270 261 aaPredicted RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 GEMP55040 296 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 TSPY1Q01534 308 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 GALNT1Q10472 559 aaPredicted RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 SLC10A2Q12908 348 aaPredicted RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 MPP3Q13368 585 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 HERC3Q15034 1050 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 PHLDB2Q86SQ0 1253 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 ADGRG6Q86SQ4 1221 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 ELMO3Q96BJ8 720 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 PIWIL1Q96J94 861 aaKnown RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 SRPK1Q96SB4 655 aaKnown RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 RBBP8Q99708 897 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 IQCGQ9H095 443 aaKnown RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 CDHR5Q9HBB8 845 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 TMCO1Q9UM00 188 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 CHMP2BQ9UQN3 213 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 IRAK2O43187 625 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 RTN3O95197 1032 aaPredicted RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 FYNP06241 537 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 DLDP09622 509 aaKnown RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 CD9P21926 228 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 PTPN3P26045 913 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 SSTR1P30872 391 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 YWHAGP61981 247 aaKnown RBP eCLIP7.3□□□□□ -1.24
FCF1-201ENST00000341162 ELAVL2Q12926 359 aaKnown RBP7.3□□□□□ -1.24
FCF1-201ENST00000341162 CRYMQ14894 314 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 TSNAXIP1Q2TAA8 658 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 SNX30Q5VWJ9 437 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 PACS1Q6VY07 963 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 SCUBE3Q8IX30 993 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 UNC5BQ8IZJ1 945 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 FITM2Q8N6M3 262 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 COLGALT1Q8NBJ5 622 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 ARNTL2Q8WYA1 636 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 P2RY11Q96G91 374 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 TEKT5Q96M29 485 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 CCDC28BQ9BUN5 200 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 GPAMQ9HCL2 828 aa7.3□□□□□ -1.24
FCF1-201ENST00000341162 BATF3Q9NR55 127 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms