RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 EGFLAMQ63HQ2 1017 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 SCARA3Q6AZY7 606 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 THOC7Q6I9Y2 204 aaKnown RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 KRT80Q6KB66 452 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 MAMDC4Q6UXC1 1216 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 EEPD1Q7L9B9 569 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 PGAM4Q8N0Y7 254 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF781Q8N8C0 355 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 RP9Q8TA86 221 aaKnown RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ACMSDQ8TDX5 336 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CNDP1Q96KN2 507 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CDH19Q9H159 772 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 PDZD7Q9H5P4 517 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 DUS2Q9NX74 493 aaKnown RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 PKD2L1Q9P0L9 805 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 COPG2Q9UBF2 871 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 DCDC2Q9UHG0 476 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 GNPTGQ9UJJ9 305 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 NUB1Q9Y5A7 615 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CORINQ9Y5Q5 1042 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 A0A087WXM4 84 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 A0A1W2PPW3 197 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 NPR1P16066 1061 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 MAGEA3P43357 314 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 GALNT2Q10471 571 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 ANKRD26P1Q6NSI1 321 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CDC42EP5Q6NZY7 148 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 C16orf87Q6PH81 154 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 TRMT1LQ7Z2T5 733 aaKnown RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 MPP5Q8N3R9 675 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 KCTD6Q8NC69 237 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 JOSD2Q8TAC2 188 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 ZSCAN18Q8TBC5 510 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 SLC7A3Q8WY07 619 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 LRTOMTQ8WZ04 291 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 BSNDQ8WZ55 320 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 RCN3Q96D15 328 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 LRRC39Q96DD0 335 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 MXRA8Q9BRK3 442 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 NTPCRQ9BSD7 190 aaKnown RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 NPLQ9BXD5 320 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CXorf21Q9HAI6 301 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 TRPV5Q9NQA5 729 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 RBAKQ9NYW8 714 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 MOCS1Q9NZB8 636 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 TMEM216Q9P0N5 145 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 PAK5Q9P286 719 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CROTQ9UKG9 612 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 ZBTB21Q9ULJ3 1066 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 PCDHB12Q9Y5F1 795 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 PCDHAC2Q9Y5I4 1007 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 TRIM64A6NGJ6 449 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 J3QRK9 145 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 TPP1O14773 563 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 LSM1O15116 133 aaKnown RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 HTRA2O43464 458 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CLASP2O75122 1294 aaKnown RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 DGKIO75912 1065 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CSPG5O95196 566 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CCDC130P13994 396 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 TNNI1P19237 187 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 GARTP22102 1010 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CNTFP26441 200 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 DCKP27707 260 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 MAGEA6P43360 314 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CYP2A13Q16696 494 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 UGCGQ16739 394 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 CCDC153Q494R4 210 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF534Q76KX8 674 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 NANOGNBQ7Z5D8 188 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 SETD3Q86TU7 594 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 UNC5BQ8IZJ1 945 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 SLC7A5P1Q8MH63 180 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF420Q8TAQ5 688 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 DEPDC1BQ8WUY9 529 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 STARD8Q92502 1023 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 FBXL8Q96CD0 374 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 EBNA1BP2Q99848 306 aaKnown RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 TDRD1Q9BXT4 1180 aaKnown RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 ZC3H12CQ9C0D7 883 aaKnown RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 WDR41Q9HAD4 459 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 PALMDQ9NP74 551 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 PCSK1NQ9UHG2 260 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 IPO11Q9UI26 975 aaKnown RBP9.63□□□□□ -0.87
NECAP1-201ENST00000339754 ERGIC3Q9Y282 383 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 GIT1Q9Y2X7 761 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 AP4S1Q9Y587 144 aa9.63□□□□□ -0.87
NECAP1-201ENST00000339754 ANKRD31Q8N7Z5 1873 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 GOLGA8TH3BQL2 631 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 CNOT3O75175 753 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 ESRRBO95718 433 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 LSM8O95777 96 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 AMHP03971 560 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 ENO3P13929 434 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 HMGB2P26583 209 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 ADORA2AP29274 412 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 BNIP3Q12983 259 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 MMRN1Q13201 1228 aa9.62□□□□□ -0.87
NECAP1-201ENST00000339754 HADHQ16836 314 aaKnown RBP9.62□□□□□ -0.87
NECAP1-201ENST00000339754 AARS2Q5JTZ9 985 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms