RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 GRIA3P42263 894 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 GPC5P78333 572 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 MESDQ14696 234 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 NR1D2Q14995 579 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 FGD3Q5JSP0 725 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 WDR78Q5VTH9 848 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 FBXW8Q8N3Y1 598 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 OR7G1Q8NGA0 311 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ATP2A3Q93084 1043 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ALPK1Q96QP1 1244 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PAIP1Q9H074 479 aaKnown RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 MTUS1Q9ULD2 1270 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 EXOC7Q9UPT5 735 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 FARP1Q9Y4F1 1045 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PCDHGA11Q9Y5H2 935 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PCDHA1Q9Y5I3 950 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 A8MU76 341 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 E9PMD0 336 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TXNDC9O14530 226 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 GUCY1B2O75343 617 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 SLITRK3O94933 977 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 KRT15P19012 456 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 EN2P19622 333 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 CXCR2P25025 360 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 HNRNPFP52597 415 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PGM5Q15124 567 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TBCCQ15814 346 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 MOGQ16653 247 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 KNOP1Q1ED39 458 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TIGD2Q4W5G0 525 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 RNASEH2BQ5TBB1 312 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 EGFLAMQ63HQ2 1017 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 RFPL4BQ6ZWI9 263 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 GALNT13Q8IUC8 556 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ELMOD1Q8N336 334 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ESX1Q8N693 406 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 EFCAB3Q8N7B9 438 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 DDHD1Q8NEL9 900 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 HELQQ8TDG4 1101 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TRUB1Q8WWH5 349 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 SOCS4Q8WXH5 440 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 FOXP3Q9BZS1 431 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 NDEL1Q9GZM8 345 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TBC1D23Q9NUY8 699 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 THEGQ9P2T0 379 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 CPQQ9Y646 472 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 MIA3Q5JRA6 1907 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TCF20Q9UGU0 1960 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PDXKO00764 312 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 DLGAP1O14490 977 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 DNALI1O14645 258 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 B4GALT4O60513 344 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TPPPO94811 219 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PTPN1P18031 435 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TGM1P22735 817 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ADORA2AP29274 412 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 GNL1P36915 607 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ADCY8P40145 1251 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TNK2Q07912 1038 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 STX3Q13277 289 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF394Q53GI3 561 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 HP1BP3Q5SSJ5 553 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 FAAH2Q6GMR7 532 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PPP1R18Q6NYC8 613 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 C11orf74Q86VG3 221 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 MCF2L2Q86YR7 1114 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 GALNT4Q8N4A0 578 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 LINC01599Q8WXQ3 324 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ACDQ96AP0 544 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF689Q96CS4 500 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TOX2Q96NM4 488 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 CCDC77Q9BR77 488 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 MECRQ9BV79 373 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 EHMT1Q9H9B1 1298 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PPCSQ9HAB8 311 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 SAYSD1Q9NPB0 183 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PXMP2Q9NR77 195 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 VPS45Q9NRW7 570 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 DNAJC16Q9Y2G8 782 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PCM1Q15154 2024 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 A0A1W2PPC1 479 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TTC34A8MYJ7 566 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 GOLGA8RI6L899 631 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 J3QRK9 145 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 KMOO15229 486 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ARHGEF15O94989 841 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 SLC25A27O95847 323 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 BMP3P12645 472 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 HMOX2P30519 316 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 SLC1A1P43005 524 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 AP3M2P53677 418 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 C21orf59P57076 290 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 PURAQ00577 322 aaKnown RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 QRICH1Q2TAL8 776 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 TCHHL1Q5QJ38 904 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 AGAP7PQ5VUJ5 663 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF280DQ6N043 979 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 FRMD7Q6ZUT3 714 aa5.74□□□□□ -1.49
CSDE1-202ENST00000339438 GET4Q7L5D6 327 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-202ENST00000339438 KRT25Q7Z3Z0 450 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms