RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 SENP7Q9BQF6 1050 aa12.93□□□□□ -0.34
DFFB-202ENST00000339350 KLC2Q9H0B6 622 aa12.93□□□□□ -0.34
DFFB-202ENST00000339350 POLR3FQ9H1D9 316 aaPredicted RBP12.93□□□□□ -0.34
DFFB-202ENST00000339350 XPNPEP1Q9NQW7 623 aa12.93□□□□□ -0.34
DFFB-202ENST00000339350 IGSF9Q9P2J2 1179 aa12.93□□□□□ -0.34
DFFB-202ENST00000339350 FEM1BQ9UK73 627 aa12.93□□□□□ -0.34
DFFB-202ENST00000339350 CLUHO75153 1309 aa12.93□□□□□ -0.34
DFFB-202ENST00000339350 TYROBPO43914 113 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 GABBR2O75899 941 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 FAM58BPP0C7Q3 252 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 CCDC130P13994 396 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 RAG1P15918 1043 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 CDK16Q00536 496 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 TUBA3CQ13748 450 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 SPOCD1Q6ZMY3 1216 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 ALYREFQ86V81 257 aaKnown RBP12.92□□□□□ -0.34
DFFB-202ENST00000339350 HSPH1Q92598 858 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 ASIC4Q96FT7 647 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 MRIQ9BWK5 157 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 ST6GALNAC4Q9H4F1 302 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
DFFB-202ENST00000339350 MAP3K20Q9NYL2 800 aaKnown RBP12.92□□□□□ -0.34
DFFB-202ENST00000339350 ACTL7BQ9Y614 415 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 MEI4A8MW99 385 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 KLHL41O60662 606 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 CDONQ4KMG0 1287 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 RNASEH2BQ5TBB1 312 aaKnown RBP12.92□□□□□ -0.34
DFFB-202ENST00000339350 AAGABQ6PD74 315 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 FAM160B2Q86V87 743 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 DEPDC4Q8N2C3 294 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 LSMEM1Q8N8F7 131 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 ZNF398Q8TD17 642 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 CCDC124Q96CT7 223 aaKnown RBP12.92□□□□□ -0.34
DFFB-202ENST00000339350 ZNF668Q96K58 619 aaPredicted RBP12.92□□□□□ -0.34
DFFB-202ENST00000339350 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 TRIM55Q9BYV6 548 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 MRPL47Q9HD33 250 aaKnown RBP12.92□□□□□ -0.34
DFFB-202ENST00000339350 MYOZ2Q9NPC6 264 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 TBC1D22BQ9NU19 505 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 PSMC3IPQ9P2W1 217 aaPredicted RBP12.92□□□□□ -0.34
DFFB-202ENST00000339350 ZNRF3Q9ULT6 936 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 AGTPBP1Q9UPW5 1226 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 CORINQ9Y5Q5 1042 aa12.92□□□□□ -0.34
DFFB-202ENST00000339350 PSMD12O00232 456 aaPredicted RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 PMM2O15305 246 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 PRPF4O43172 522 aaKnown RBP eCLIP12.91□□□□□ -0.34
DFFB-202ENST00000339350 WEE1P30291 646 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 PTGER2P43116 358 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 TPTEP56180 551 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 HIF1AQ16665 826 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 ZACNQ401N2 412 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 CEP78Q5JTW2 689 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 C6orf52Q5T4I8 152 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 NBPF12Q5TAG4 269 aaPredicted RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 CENPUQ71F23 418 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 FBXO36Q8NEA4 188 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 GRIN3AQ8TCU5 1115 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 ZNF606Q8WXB4 792 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 WDR83Q9BRX9 315 aaKnown RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 TARS2Q9BW92 718 aaKnown RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 Q9H521 79 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 RBAKQ9NYW8 714 aaPredicted RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 HMGXB4Q9UGU5 601 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 PCSK1NQ9UHG2 260 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 MAP3K6O95382 1288 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 CST3P01034 146 aaPredicted RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 PRKACAP17612 351 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 NELFEP18615 380 aaKnown RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 JAK1P23458 1154 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 RPL26P61254 145 aaKnown RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 PTP4A2Q12974 167 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 PLEKHA7Q6IQ23 1121 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 RWDD4Q6NW29 188 aaKnown RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 C11orf96Q7Z7L8 435 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 USP37Q86T82 979 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 RALGPS2Q86X27 583 aaPredicted RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 CCDC60Q8IWA6 550 aaPredicted RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 CLIP4Q8N3C7 705 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 EMC1Q8N766 993 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 MRPL9Q9BYD2 267 aaKnown RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 A0A0B4J203 849 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 A8MX80 341 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 CLOCKO15516 846 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 GMNNO75496 209 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 FAM155BO75949 473 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 MYO1DO94832 1006 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 ESRRBO95718 433 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 EDN1P05305 212 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 WEE2P0C1S8 567 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 EPHB1P54762 984 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 OTUD4Q01804 1114 aaKnown RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 BAATQ14032 418 aaPredicted RBP12.91□□□□□ -0.34
DFFB-202ENST00000339350 EFHC1Q5JVL4 640 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 DNAJC24Q6P3W2 148 aa12.91□□□□□ -0.34
DFFB-202ENST00000339350 FIP1L1Q6UN15 594 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms