RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SHC2P98077 582 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 GRIK2Q13002 908 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 TPD52L1Q16890 204 aaPredicted RBP13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 PITRM1Q5JRX3 1037 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 MIIPQ5JXC2 388 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 MPP7Q5T2T1 576 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 FAM183BPQ6ZVS7 135 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 ENOSF1Q7L5Y1 443 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 C14orf80Q86SX3 495 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 HDDC3Q8N4P3 179 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 C1orf131Q8NDD1 294 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 C1orf216Q8TAB5 229 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 SNX19Q92543 992 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 PPP1R13BQ96KQ4 1090 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 SCNM1Q9BWG6 230 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 ADAM33Q9BZ11 813 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 SUN2Q9UH99 717 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 ERVW-1Q9UQF0 538 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 SNX10Q9Y5X0 201 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 A0A1B0GTW7 788 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 A0A1B0GVT2 93 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 KCNU1A8MYU2 1149 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 H0Y626 953 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 IRAK2O43187 625 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 HYAL3O43820 417 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 LUC7L3O95232 432 aaKnown RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 SYPP08247 313 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 VAV1P15498 845 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 GNSP15586 552 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 TFE3P19532 575 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 MZF1P28698 734 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 DPP6P42658 865 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 STK19P49842 368 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 ZNF445P59923 1031 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 RNASE9P60153 205 aaKnown RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 SIM1P81133 766 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 VWA3BQ502W6 1294 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 C2CD6Q53TS8 623 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 KCNT1Q5JUK3 1230 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 LAYNQ6UX15 382 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 CHSY1Q86X52 802 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 CHCHD4Q8N4Q1 142 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 PNPLA1Q8N8W4 532 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 CADM4Q8NFZ8 388 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 OR52K2Q8NGK3 314 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 IGSF8Q969P0 613 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 FAM129BQ96TA1 746 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 PRMT1Q99873 361 aaKnown RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 DDX50Q9BQ39 737 aaKnown RBP13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 SLC32A1Q9H598 525 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 ANLNQ9NQW6 1124 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 SERGEFQ9UGK8 458 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 EPG5Q9HCE0 2579 aa13.83□□□□□ -0.2
NUDCD3-201ENST00000338427 FAM47DPA6NHR8 397 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 PLK4O00444 970 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 BCAT2O15382 392 aaPredicted RBP13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 FSBPO95073 299 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 PRKCSHP14314 528 aaPredicted RBP13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 CDK17Q00537 523 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 PTK2Q05397 1052 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 NME3Q13232 169 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 DRAP1Q14919 205 aaPredicted RBP13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 MAN2A1Q16706 1144 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 PTPN20Q4JDL3 420 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 PRAMEF14Q5SWL7 426 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 C9orf64Q5T6V5 341 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 FBXL22Q6P050 247 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 BEND5Q7L4P6 421 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 MMAAQ8IVH4 418 aaKnown RBP13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 GANCQ8TET4 914 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 RNF34Q969K3 372 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 BIRC7Q96CA5 298 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 SLC2A13Q96QE2 648 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 TUBGCP2Q9BSJ2 902 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 NEUROG2Q9H2A3 272 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 NDST4Q9H3R1 872 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 FAM204AQ9H8W3 233 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 EBF2Q9HAK2 575 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 TMPRSS4Q9NRS4 437 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 DNAAF2Q9NVR5 837 aaKnown RBP13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 KIAA1522Q9P206 1035 aaPredicted RBP13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 RALYQ9UKM9 306 aaKnown RBP13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 PCDHGC3Q9UN70 934 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 CACNA1BQ00975 2339 aa13.82□□□□□ -0.2
NUDCD3-201ENST00000338427 GTPBP10A4D1E9 387 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 I6L893 689 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 MID1O15344 667 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 SART1O43290 800 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 APOEP02649 317 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 DNTTP04053 509 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 PDGFRAP16234 1089 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 KRT9P35527 623 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 METAP1P53582 386 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 ST8SIA6P61647 398 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 SLC6A3Q01959 620 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 CENPCQ03188 943 aa13.81□□□□□ -0.2
NUDCD3-201ENST00000338427 NNTQ13423 1086 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms