RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CFAP69A5D8W1 941 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 GJA1P17302 382 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 HDCP19113 662 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 HOXC13P31276 330 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 ACTN2P35609 894 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 RAB30Q15771 203 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 HEATR6Q6AI08 1181 aaKnown RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 FBXL22Q6P050 247 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 HDXQ7Z353 690 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 CHSY1Q86X52 802 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 CAVIN3Q969G5 261 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 PLD4Q96BZ4 506 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 LRRC45Q96CN5 670 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 CELF6Q96J87 481 aaKnown RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 QKIQ96PU8 341 aaKnown RBP eCLIP15.13■□□□□ 0.01
CBX3-201ENST00000337620 GCNAQ96QF7 691 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 SLC22A12Q96S37 553 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 HCFC1R1Q9NWW0 138 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 MTCL1Q9Y4B5 1905 aaKnown RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 HACD1B0YJ81 288 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 PPP1R12AO14974 1030 aaPredicted RBP15.12■□□□□ 0.01
CBX3-201ENST00000337620 SLC11A2P49281 568 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 ARTNQ5T4W7 220 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 ZNF697Q5TEC3 545 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 ADGRD2Q7Z7M1 963 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 DENND1CQ8IV53 801 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 MAB21L3Q8N8X9 362 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 BBOF1Q8ND07 529 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 TTC16Q8NEE8 873 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 GDPD5Q8WTR4 605 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 KLF16Q9BXK1 252 aaPredicted RBP15.12■□□□□ 0.01
CBX3-201ENST00000337620 FUT8Q9BYC5 575 aa15.12■□□□□ 0.01
CBX3-201ENST00000337620 MTRF1LQ9UGC7 380 aaKnown RBP15.12■□□□□ 0.01
CBX3-201ENST00000337620 TRANK1O15050 2925 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 DNALI1O14645 258 aaPredicted RBP15.11■□□□□ 0.01
CBX3-201ENST00000337620 ACSL4O60488 711 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 STC2O76061 302 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 CDC25CP30307 473 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 CORO1AP31146 461 aaKnown RBP15.11■□□□□ 0.01
CBX3-201ENST00000337620 MTA1Q13330 715 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 CASP8Q14790 479 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 NADSYN1Q6IA69 706 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 RTL10Q7L3V2 364 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 ZNF683Q8IZ20 524 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 HTR3CQ8WXA8 447 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 RPRD1AQ96P16 312 aaPredicted RBP15.11■□□□□ 0.01
CBX3-201ENST00000337620 ZYG11BQ9C0D3 744 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 SEPT10Q9P0V9 454 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 TPX2Q9ULW0 747 aaKnown RBP15.11■□□□□ 0.01
CBX3-201ENST00000337620 RAD54BQ9Y620 910 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 TP73O15350 636 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 NCAM2O15394 837 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 VAV1P15498 845 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 PTPN2P17706 415 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 MX2P20592 715 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 TACR2P21452 398 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 IRAK1P51617 712 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 SMAD3P84022 425 aaKnown RBP15.11■□□□□ 0.01
CBX3-201ENST00000337620 ACBD5Q5T8D3 534 aaPredicted RBP15.11■□□□□ 0.01
CBX3-201ENST00000337620 TFAP2DQ7Z6R9 452 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 CCDC110Q8TBZ0 833 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 IGSF8Q969P0 613 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 PRMT1Q99873 361 aaKnown RBP15.11■□□□□ 0.01
CBX3-201ENST00000337620 FERMT1Q9BQL6 677 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 ADAM7Q9H2U9 754 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 TLE6Q9H808 572 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 NDFIP2Q9NV92 336 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 PPARGC1AQ9UBK2 798 aaKnown RBP15.11■□□□□ 0.01
CBX3-201ENST00000337620 HCFC2Q9Y5Z7 792 aa15.11■□□□□ 0.01
CBX3-201ENST00000337620 DFFAO00273 331 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 NRG2O14511 850 aaPredicted RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 SASH3O75995 380 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 CNTN5O94779 1100 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 C1RP00736 705 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 KLKB1P03952 638 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 CKMP06732 381 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 CAV1Q03135 178 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 PRKD1Q15139 912 aaPredicted RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 ALFQ53S48 1182 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 STXBP5Q5T5C0 1151 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 LGI2Q8N0V4 545 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 LZTR1Q8N653 840 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 RTL3Q8N8U3 475 aaKnown RBP15.1■□□□□ 0.01
CBX3-201ENST00000337620 DEPDC1BQ8WUY9 529 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 WBP2Q969T9 261 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 ZBTB9Q96C00 473 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 RTP4Q96DX8 246 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 P2RY11Q96G91 374 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 FAM129AQ9BZQ8 928 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 KLC2Q9H0B6 622 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 PAK5Q9P286 719 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 DPP7Q9UHL4 492 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 CPQQ9Y646 472 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 F5H5T6 163 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 XYLBO75191 536 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 RHOQP17081 205 aa15.1■□□□□ 0.01
CBX3-201ENST00000337620 CCR2P41597 374 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms