RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 SERPINB11Q96P15 392 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 BTBD1Q9H0C5 482 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 RSPH9Q9H1X1 276 aaPredicted RBP16.56■□□□□ 0.24
MUC1-201ENST00000337604 TM9SF3Q9HD45 589 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 ACP6Q9NPH0 428 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 SERGEFQ9UGK8 458 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 TLR6Q9Y2C9 796 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 PTPRBP23467 1997 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 PLXNA2O75051 1894 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 ACACAQ13085 2346 aa16.56■□□□□ 0.24
MUC1-201ENST00000337604 CELSR3Q9NYQ7 3312 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 BICDL2A1A5D9 508 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 PAPSS1O43252 624 aaPredicted RBP16.55■□□□□ 0.24
MUC1-201ENST00000337604 MOCS2O96007 188 aaPredicted RBP16.55■□□□□ 0.24
MUC1-201ENST00000337604 DNTTP04053 509 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 CSKP41240 450 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 CTSOP43234 321 aaPredicted RBP16.55■□□□□ 0.24
MUC1-201ENST00000337604 PITX1P78337 314 aaPredicted RBP16.55■□□□□ 0.24
MUC1-201ENST00000337604 CETN1Q12798 172 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 KIF19Q2TAC6 998 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 KCNT1Q5JUK3 1230 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 ZNF776Q68DI1 518 aaPredicted RBP16.55■□□□□ 0.24
MUC1-201ENST00000337604 DBX2Q6ZNG2 339 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 CFAP52Q8N1V2 620 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 SLC4A5Q9BY07 1137 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 ST7Q9NRC1 585 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 TOR4AQ9NXH8 423 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 TJP2Q9UDY2 1190 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 BTBD3Q9Y2F9 522 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 PCDHB9Q9Y5E1 797 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 SNX11Q9Y5W9 270 aa16.55■□□□□ 0.24
MUC1-201ENST00000337604 DSPP15924 2871 aaKnown RBP16.54■□□□□ 0.24
MUC1-201ENST00000337604 E5RJQ4 531 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 TAF4O00268 1085 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 SIN3BO75182 1162 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 GADD45BO75293 160 aaPredicted RBP16.54■□□□□ 0.24
MUC1-201ENST00000337604 IGLV3-25P01717 112 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
MUC1-201ENST00000337604 IGHV4-34P06331 123 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 KRT5P13647 590 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 GRIA4P48058 902 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 AFF3P51826 1226 aaKnown RBP16.54■□□□□ 0.24
MUC1-201ENST00000337604 PAK1Q13153 545 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 CDH18Q13634 790 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 MEA1Q16626 185 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 HNRNPA1L2Q32P51 320 aaKnown RBP16.54■□□□□ 0.24
MUC1-201ENST00000337604 TTC31Q49AM3 519 aaPredicted RBP16.54■□□□□ 0.24
MUC1-201ENST00000337604 DCAF6Q58WW2 860 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 GJB7Q6PEY0 223 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 IL27RAQ6UWB1 636 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 CARNMT1Q8N4J0 409 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
MUC1-201ENST00000337604 OSGEPQ9NPF4 335 aa16.54■□□□□ 0.24
MUC1-201ENST00000337604 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
MUC1-201ENST00000337604 BECN2A8MW95 431 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 C10orf142B7Z368 130 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 SART1O43290 800 aaKnown RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 FSBPO95073 299 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 LETM1O95202 739 aaPredicted RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 LUC7L3O95232 432 aaKnown RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 ASLP04424 464 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 RDXP35241 583 aaKnown RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 ACADSBP45954 432 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 APBA1Q02410 837 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 EIF4EBP2Q13542 120 aaPredicted RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 BECN1Q14457 450 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 ARID5BQ14865 1188 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 PITRM1Q5JRX3 1037 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 RAP1GAP2Q684P5 730 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 BEND5Q7L4P6 421 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 DHX40Q8IX18 779 aaKnown RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 ZNF557Q8N988 423 aaPredicted RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 SETD7Q8WTS6 366 aaKnown RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 STK32AQ8WU08 396 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 DDX50Q9BQ39 737 aaKnown RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 SRRTQ9BXP5 876 aaKnown RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 SGK2Q9HBY8 427 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 SUN2Q9UH99 717 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 ANKRD6Q9Y2G4 727 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 PCDHGB2Q9Y5G2 931 aa16.53■□□□□ 0.24
MUC1-201ENST00000337604 GOLGA4Q13439 2230 aaKnown RBP16.53■□□□□ 0.24
MUC1-201ENST00000337604 LAMA5O15230 3695 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 ITIH6Q6UXX5 1313 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 ATRXP46100 2492 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 TYW5A2RUC4 315 aaKnown RBP16.52■□□□□ 0.24
MUC1-201ENST00000337604 TTC34A8MYJ7 566 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 MID1O15344 667 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 FLRT2O43155 660 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 DKK1O94907 266 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 GNA14O95837 355 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 CD27P26842 260 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 NUMBP49757 651 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 TAF5Q15542 800 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 ZC3H12AQ5D1E8 599 aaKnown RBP16.52■□□□□ 0.24
MUC1-201ENST00000337604 C9orf64Q5T6V5 341 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 KIAA0895LQ68EN5 471 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 USP30Q70CQ3 517 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 TMEM110Q86TL2 294 aa16.52■□□□□ 0.24
MUC1-201ENST00000337604 CIR1Q86X95 450 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms