RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 EME2A4GXA9 379 aaPredicted RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 STAU1O95793 577 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 GLP2RO95838 553 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 POU5F1Q01860 360 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 PRKCQQ04759 706 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 CCDC185Q8N715 623 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 MYDGFQ969H8 173 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ERLEC1Q96DZ1 483 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 HPDLQ96IR7 371 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ADI1Q9BV57 179 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 STOML2Q9UJZ1 356 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 TMEM114B3SHH9 223 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SHBGP04278 402 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 MMP10P09238 476 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 USP46P62068 366 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 FAM172AQ8WUF8 416 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 MIEF1Q9NQG6 463 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 USP18Q9UMW8 372 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ANKRD6Q9Y2G4 727 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 NCAPD2Q15021 1401 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 KPNA5O15131 536 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 COX4I1P13073 169 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 IDH2P48735 452 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 CLK2P49760 499 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 ANTXR2P58335 489 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 UBAP2LQ14157 1087 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 RUNDC3AQ59EK9 446 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 PEG10Q86TG7 708 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 SFRP1Q8N474 314 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SIPA1Q96FS4 1042 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SEMA6BQ9H3T3 888 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 UBP1Q9NZI7 540 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 GGA2Q9UJY4 613 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 COG5Q9UP83 839 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SHOC2Q9UQ13 582 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SETD1BQ9UPS6 1966 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 SEC22BO75396 215 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 FARP2O94887 1054 aaPredicted RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 NADKO95544 446 aaPredicted RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 CD4P01730 458 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ITGB3P05106 788 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 DRD4P21917 467 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 RRM1P23921 792 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ALDH9A1P49189 494 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 TNK2Q07912 1038 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 FRG1Q14331 258 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 FIGNQ5HY92 759 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SLC47A2Q86VL8 602 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 CPNE1Q99829 537 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 FUCA2Q9BTY2 467 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ACTR8Q9H981 624 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 TIMMDC1Q9NPL8 285 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 BAIAP2Q9UQB8 552 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SAMD9Q5K651 1589 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 PPP2R1BP30154 601 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 CCR3P51677 355 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ZCCHC8Q6NZY4 707 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 KLHL28Q9NXS3 571 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 KIF1BO60333 1816 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 NPHP4O75161 1426 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 SYNCRIPO60506 623 aaKnown RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CYP7B1O75881 506 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TTC23Q5W5X9 447 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 C16orf46Q6P387 395 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 PAGE2Q7Z2X7 111 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 OSBPL11Q9BXB4 747 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CLPBQ9H078 707 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 PIH1D1Q9NWS0 290 aaKnown RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 DDIT4Q9NX09 232 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 IKZF3Q9UKT9 509 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 A0A096LPK6 155 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ATP6V1G1O75348 118 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 VPS4BO75351 444 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 PGAM1P18669 254 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 NUMBP49757 651 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 RPS6KA3P51812 740 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CDC42P60953 191 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TYSND1Q2T9J0 566 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 KCNMB4Q86W47 210 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CRISPLD1Q9H336 500 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CLN6Q9NWW5 311 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 KLF15Q9UIH9 416 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 PRELID1Q9Y255 219 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 FAM92AA1XBS5 289 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 FAM25EA8MYX2 175 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CES2O00748 559 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 WFS1O76024 890 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 MGAT1P26572 445 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 GRK4P32298 578 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TGFBR2P37173 567 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 SPDYCQ5MJ68 293 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 C10orf120Q5SQS8 335 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ERMARDQ5T6L9 678 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ARMC6Q6NXE6 501 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TMC7Q7Z402 723 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms