RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ASTLQ6HA08 431 aaPredicted RBP17.04■□□□□ 0.32
SHOX-201ENST00000334060 RHBDF2Q6PJF5 856 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 RFX8Q6ZV50 586 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 NAT16Q8N8M0 369 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 FAM71BQ8TC56 605 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 CELF6Q96J87 481 aaKnown RBP17.04■□□□□ 0.32
SHOX-201ENST00000334060 NECTIN4Q96NY8 510 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 RPRD1AQ96P16 312 aaPredicted RBP17.04■□□□□ 0.32
SHOX-201ENST00000334060 HAPLN3Q96S86 360 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 PHF7Q9BWX1 381 aaPredicted RBP17.04■□□□□ 0.32
SHOX-201ENST00000334060 TRPV4Q9HBA0 871 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 EPS15L1Q9UBC2 864 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 EEF2KO00418 725 aaKnown RBP17.03■□□□□ 0.32
SHOX-201ENST00000334060 CEP104O60308 925 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 EPHB2P29323 1055 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 SLC10A2Q12908 348 aaPredicted RBP17.03■□□□□ 0.32
SHOX-201ENST00000334060 GAB4Q2WGN9 574 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 EML3Q32P44 896 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 ARL13BQ3SXY8 428 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 UNC45BQ8IWX7 931 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 ADGRG2Q8IZP9 1017 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 PLD5Q8N7P1 536 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 LRRN4CLQ8ND94 238 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 NECAB3Q96P71 396 aaPredicted RBP17.03■□□□□ 0.32
SHOX-201ENST00000334060 KLC2Q9H0B6 622 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 OSBPL2Q9H1P3 480 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 KCNK12Q9HB15 430 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 STOML2Q9UJZ1 356 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 ACTL7AQ9Y615 435 aa17.03■□□□□ 0.32
SHOX-201ENST00000334060 E2F8A0AVK6 867 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 CTAGE9A4FU28 777 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 ANHXE9PGG2 379 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 ZRANB2O95218 330 aaKnown RBP eCLIP17.02■□□□□ 0.32
SHOX-201ENST00000334060 CYP17A1P05093 508 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 ERCC2P18074 760 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 NRLP54845 237 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 GBE1Q04446 702 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 FYB2Q5VWT5 728 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 NCBP2-AS2Q69YL0 99 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 ARHGAP36Q6ZRI8 547 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 ZNF771Q7L3S4 317 aaPredicted RBP17.02■□□□□ 0.32
SHOX-201ENST00000334060 NLRP14Q86W24 1093 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 FAM217AQ8IXS0 508 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 TDRD5Q8NAT2 981 aaKnown RBP17.02■□□□□ 0.32
SHOX-201ENST00000334060 DEPDC1BQ8WUY9 529 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 ATG4AQ8WYN0 398 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 FAM83CQ9BQN1 747 aa17.02■□□□□ 0.32
SHOX-201ENST00000334060 NOL6Q9H6R4 1146 aaKnown RBP17.02■□□□□ 0.32
SHOX-201ENST00000334060 DUS2Q9NX74 493 aaKnown RBP17.02■□□□□ 0.32
SHOX-201ENST00000334060 MIF4GDA9UHW6 222 aaKnown RBP17.02■□□□□ 0.31
SHOX-201ENST00000334060 RIOK3O14730 519 aaKnown RBP17.02■□□□□ 0.31
SHOX-201ENST00000334060 MFSD11O43934 449 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 TBL1XO60907 577 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 HOXD9P28356 352 aaPredicted RBP17.02■□□□□ 0.31
SHOX-201ENST00000334060 GDI1P31150 447 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 SLC11A2P49281 568 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 TPI1P60174 286 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 TAZQ16635 292 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 OTOP3Q7RTS5 596 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 CREG2Q8IUH2 290 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 EXD1Q8NHP7 514 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 CD320Q9NPF0 282 aa17.02■□□□□ 0.31
SHOX-201ENST00000334060 DOCK4Q8N1I0 1966 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 NEDD8-MDP1E9PL57 170 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 ARNTLO00327 626 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 DCLK1O15075 740 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 SLC2A3P11169 496 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 PFKLP17858 780 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 WEE1P30291 646 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 KPNA1P52294 538 aaPredicted RBP17.01■□□□□ 0.31
SHOX-201ENST00000334060 MRPS25P82663 173 aaKnown RBP17.01■□□□□ 0.31
SHOX-201ENST00000334060 SIX1Q15475 284 aaPredicted RBP17.01■□□□□ 0.31
SHOX-201ENST00000334060 C1orf228Q6PIY5 440 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 UBL4BQ8N7F7 174 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 OSCP1Q8WVF1 389 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 FAF2Q96CS3 445 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 RNF157Q96PX1 679 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 AP1M1Q9BXS5 423 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 OSBPL8Q9BZF1 889 aa17.01■□□□□ 0.31
SHOX-201ENST00000334060 LSM7Q9UK45 103 aaKnown RBP17.01■□□□□ 0.31
SHOX-201ENST00000334060 IGLV3-10A0A075B6K4 115 aa17■□□□□ 0.31
SHOX-201ENST00000334060 A0A0D9SEW6 157 aa17■□□□□ 0.31
SHOX-201ENST00000334060 F5H5T6 163 aa17■□□□□ 0.31
SHOX-201ENST00000334060 FGGP02679 453 aa17■□□□□ 0.31
SHOX-201ENST00000334060 SLC6A11P48066 632 aa17■□□□□ 0.31
SHOX-201ENST00000334060 FCHO2Q0JRZ9 810 aa17■□□□□ 0.31
SHOX-201ENST00000334060 LEKR1Q6ZMV7 388 aa17■□□□□ 0.31
SHOX-201ENST00000334060 RFX6Q8HWS3 928 aa17■□□□□ 0.31
SHOX-201ENST00000334060 MFSD6LQ8IWD5 586 aa17■□□□□ 0.31
SHOX-201ENST00000334060 NUP205Q92621 2012 aa17■□□□□ 0.31
SHOX-201ENST00000334060 DRGXA6NNA5 263 aa17■□□□□ 0.31
SHOX-201ENST00000334060 CST8O60676 142 aa17■□□□□ 0.31
SHOX-201ENST00000334060 URI1O94763 535 aaPredicted RBP17■□□□□ 0.31
SHOX-201ENST00000334060 TCF3P15923 654 aa17■□□□□ 0.31
SHOX-201ENST00000334060 DESP17661 470 aa17■□□□□ 0.31
SHOX-201ENST00000334060 GLDCP23378 1020 aa17■□□□□ 0.31
SHOX-201ENST00000334060 HOXC13P31276 330 aa17■□□□□ 0.31
SHOX-201ENST00000334060 KLF1Q13351 362 aaPredicted RBP17■□□□□ 0.31
SHOX-201ENST00000334060 DHCR24Q15392 516 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms