RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 TCRBV5S1A1TA0A578 114 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 LILRB5O75023 590 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 ADAM23O75077 832 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 LUC7L3O95232 432 aaKnown RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 MOCS3O95396 460 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 GJB6O95452 261 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 MYBL1P10243 752 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 CHRM1P11229 460 aaPredicted RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 PABPC1P11940 636 aaKnown RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 POLR2EP19388 210 aaKnown RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 ZNF143P52747 638 aaPredicted RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 ATXN1P54253 815 aaKnown RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 DMWDQ09019 674 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 SLC12A1Q13621 1099 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 C15orf59Q2T9L4 293 aaPredicted RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 TMEM92Q6UXU6 159 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 CHST9Q7L1S5 443 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 FAM131BQ86XD5 332 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 OLIG1Q8TAK6 271 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 MYEOVQ96EZ4 313 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 MCEEQ96PE7 176 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 PHOX2BQ99453 314 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 CNPY3Q9BT09 278 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 MRPL47Q9HD33 250 aaKnown RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 ZDHHC4Q9NPG8 344 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 THAP10Q9P2Z0 257 aaPredicted RBP14.47□□□□□ -0.09
LIMS1-201ENST00000332345 HCN2Q9UL51 889 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 VANGL2Q9ULK5 521 aa14.47□□□□□ -0.09
LIMS1-201ENST00000332345 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.46□□□□□ -0.09
LIMS1-201ENST00000332345 A0A1B0GVM2 712 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 TCAF2A6NFQ2 919 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 AXIN1O15169 862 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 CLDN11O75508 207 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 LMNAP02545 664 aaKnown RBP14.46□□□□□ -0.09
LIMS1-201ENST00000332345 HOXB2P14652 356 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 CD70P32970 193 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 ADRA1BP35368 520 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 WASP42768 502 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 PXNP49023 591 aaPredicted RBP14.46□□□□□ -0.09
LIMS1-201ENST00000332345 RPL7AP62424 266 aaKnown RBP14.46□□□□□ -0.09
LIMS1-201ENST00000332345 ZNF177Q13360 481 aaPredicted RBP14.46□□□□□ -0.09
LIMS1-201ENST00000332345 MAMLD1Q13495 774 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 C5orf22Q49AR2 442 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 PPP1R15BQ5SWA1 713 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 TMEM215Q68D42 235 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 MBLAC2Q68D91 279 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 PLEKHA7Q6IQ23 1121 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 ADIPOR2Q86V24 386 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 FAM172AQ8WUF8 416 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 ACOX2Q99424 681 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 GABRG3Q99928 467 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 RBSNQ9H1K0 784 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 CNOT8Q9UFF9 292 aaKnown RBP14.46□□□□□ -0.09
LIMS1-201ENST00000332345 RAB23Q9ULC3 237 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 STON1Q9Y6Q2 735 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 SCINQ9Y6U3 715 aa14.46□□□□□ -0.09
LIMS1-201ENST00000332345 VPS13AQ96RL7 3174 aa14.46□□□□□ -0.1
LIMS1-201ENST00000332345 HRO43593 1189 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 DLDP09622 509 aaKnown RBP14.45□□□□□ -0.1
LIMS1-201ENST00000332345 CDH4P55283 916 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 LMAN2Q12907 356 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 ZNF234Q14588 700 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 STARD3Q14849 445 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 USP39Q53GS9 565 aaKnown RBP14.45□□□□□ -0.1
LIMS1-201ENST00000332345 FSCBQ5H9T9 825 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 SH3PXD2AQ5TCZ1 1133 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 ANO7Q6IWH7 933 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 ALKBH5Q6P6C2 394 aaKnown RBP14.45□□□□□ -0.1
LIMS1-201ENST00000332345 C14orf80Q86SX3 495 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 CCAR2Q8N163 923 aaKnown RBP14.45□□□□□ -0.1
LIMS1-201ENST00000332345 PGBD3Q8N328 593 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 WFDC5Q8TCV5 224 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 IGSF8Q969P0 613 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 TTC17Q96AE7 1141 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 ZNF653Q96CK0 615 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 LMLNQ96KR4 655 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 DNAJC7Q99615 494 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 OSBPL2Q9H1P3 480 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 ANLNQ9NQW6 1124 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 CACNA2D2Q9NY47 1150 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 BCCIPQ9P287 314 aaKnown RBP eCLIP14.45□□□□□ -0.1
LIMS1-201ENST00000332345 ARHGAP20Q9P2F6 1191 aa14.45□□□□□ -0.1
LIMS1-201ENST00000332345 A0A087X0T9 212 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 A0A1W2PQF6 199 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 TCRBV21S2A2A0A5A6 115 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 TMEM191CA6NGB0 347 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 DRGXA6NNA5 263 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 WASH3PC4AMC7 463 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 E9PAM4 449 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 SYNCRIPO60506 623 aaKnown RBP14.44□□□□□ -0.1
LIMS1-201ENST00000332345 SRGAP2O75044 1071 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 ASLP04424 464 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 PLEKP08567 350 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-201ENST00000332345 FAM228BP0C875 321 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 HOXC13P31276 330 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 IL12RB1P42701 662 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 MRE11P49959 708 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 HDAC4P56524 1084 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 ST8SIA6P61647 398 aa14.44□□□□□ -0.1
LIMS1-201ENST00000332345 ENPP2Q13822 863 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms