RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 USP21Q9UK80 565 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 DOCK5Q9H7D0 1870 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 SCN9AQ15858 1988 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 GOLGA8TH3BQL2 631 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 BIRC5O15392 142 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PEX10O60683 326 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 USP12O75317 370 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 GSRP00390 522 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 TSHRP16473 764 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 GPD1P21695 349 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 SLC5A2P31639 672 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ASPAP45381 313 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PHKA2P46019 1235 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 DBN1Q16643 649 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 XKR3Q5GH77 459 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ARCQ7LC44 396 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 KBTBD6Q86V97 674 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 TMEM192Q8IY95 271 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 SNX31Q8N9S9 440 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 AGAP3Q96P47 875 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 CCT7Q99832 543 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PKP2Q99959 881 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ZNF518BQ9C0D4 1074 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ZNF180Q9UJW8 692 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PSMD13Q9UNM6 376 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 EFR3BQ9Y2G0 817 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 TBC1D30Q9Y2I9 924 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 YDJCA8MPS7 323 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 H0YCG3 227 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 TRDMT1O14717 391 aaKnown RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 ZSCAN9O15535 394 aaPredicted RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 RGS20O76081 388 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PENKP01210 267 aaPredicted RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 TNNC2P02585 160 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 CHRNGP07510 517 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 FAM58BPP0C7Q3 252 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 KCNA2P16389 499 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PRAMEP78395 509 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 CAPSQ13938 189 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 HSP90AA5PQ58FG0 334 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ZNF667Q5HYK9 610 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 SNRNP48Q6IEG0 339 aaKnown RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 BRSK2Q8IWQ3 736 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PLD6Q8N2A8 252 aaKnown RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 C12orf29Q8N999 325 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 NUF2Q9BZD4 464 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ZNF302Q9NR11 478 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ADA2Q9NZK5 511 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 SLX4Q8IY92 1834 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 INO80B-WBP1J3KQ70 363 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 CPA3P15088 417 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 TFE3P19532 575 aaPredicted RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 GLRBP48167 497 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 CDH15P55291 814 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 MS4A2Q01362 244 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 SP2Q02086 613 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 DUS1LQ6P1R4 473 aaKnown RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 PACS1Q6VY07 963 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 NAPRTQ6XQN6 538 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 VSIG10LQ86VR7 867 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 LILRA2Q8N149 483 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 RNF149Q8NC42 400 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 FAM151AQ8WW52 585 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 EME1Q96AY2 570 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 NLRP4Q96MN2 994 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 FRMD8P1Q9BZ68 369 aaPredicted RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 INO80BQ9C086 356 aaPredicted RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 RPAP3Q9H6T3 665 aaPredicted RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 SLC38A10Q9HBR0 1119 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PDLIM7Q9NR12 457 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 HES2Q9Y543 173 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 FAM159BA6NKW6 160 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 BOLA2-SMG1P6H3BVE0 249 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 GLRA3O75311 464 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 TRMUO75648 421 aaKnown RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 TNFAIP8O95379 198 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ASNSP08243 561 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 TFPTP0C1Z6 253 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 CXCL8P10145 99 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 MPSTP25325 297 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 STT3AP46977 705 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 MTTPP55157 894 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 IRF9Q00978 393 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 SLC10A2Q12908 348 aaPredicted RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 KCTD21Q4G0X4 260 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 OGFRL1Q5TC84 451 aaPredicted RBP8.08□□□□□ -1.12
VMA21-201ENST00000330374 KLC3Q6P597 504 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 KCNT2Q6UVM3 1135 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 FAM183BPQ6ZVS7 135 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 SPNS2Q8IVW8 549 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 SCUBE3Q8IX30 993 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 ERLEC1Q96DZ1 483 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PORCNQ9H237 461 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 PNPLA8Q9NP80 782 aa8.08□□□□□ -1.12
VMA21-201ENST00000330374 B4GALT5O43286 388 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 MED7O43513 233 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 PTPN1P18031 435 aaKnown RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 MAGEA10P43363 369 aaPredicted RBP8.07□□□□□ -1.12
VMA21-201ENST00000330374 ART3Q13508 389 aa8.07□□□□□ -1.12
VMA21-201ENST00000330374 FSCBQ5H9T9 825 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms