RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.77■□□□□ 0.11
BRCC3-201ENST00000330045 SEPT10Q9P0V9 454 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.11
BRCC3-201ENST00000330045 ARHGAP42A6NI28 874 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 SIN3BO75182 1162 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 SMIM24O75264 130 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 FKBP6O75344 327 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 LMO2P25791 158 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PSMB4P28070 264 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 TYK2P29597 1187 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 HOXA11P31270 313 aaPredicted RBP15.76■□□□□ 0.11
BRCC3-201ENST00000330045 GNL1P36915 607 aaPredicted RBP15.76■□□□□ 0.11
BRCC3-201ENST00000330045 GLUD2P49448 558 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 SULT1E1P49888 294 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF157P51786 506 aaPredicted RBP15.76■□□□□ 0.11
BRCC3-201ENST00000330045 SMAD1Q15797 465 aaKnown RBP15.76■□□□□ 0.11
BRCC3-201ENST00000330045 KIZQ2M2Z5 673 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PPM1JQ5JR12 505 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 EFHC1Q5JVL4 640 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 MARCH8Q5T0T0 291 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 C9orf57Q5W0N0 161 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 DPP9Q86TI2 863 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 RASSF3Q86WH2 238 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 DEFB106AQ8N104 65 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 CCNYQ8ND76 341 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 LENG1Q96BZ8 264 aaPredicted RBP15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PGBD4Q96DM1 585 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 HSFY1Q96LI6 401 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 SORT1Q99523 831 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PPP1R12CQ9BZL4 782 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PRDM16Q9HAZ2 1276 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 RNF19AQ9NV58 838 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PNPOQ9NVS9 261 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 TMEM216Q9P0N5 145 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 COPG2Q9UBF2 871 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 GINS2Q9Y248 185 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 HES2Q9Y543 173 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 ASB3Q9Y575 518 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PRKCGP05129 697 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 POLBP06746 335 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 ERVK-10P10266 1014 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 IDH3AP50213 366 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 COPAP53621 1224 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 DSG1Q02413 1049 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 GRIK4Q16099 956 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 GSTA3Q16772 222 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 SLC25A52Q3SY17 297 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 SLC27A1Q6PCB7 646 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 IZUMO2Q6UXV1 221 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 ATG14Q6ZNE5 492 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 MAVSQ7Z434 540 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 POU5F2Q8N7G0 328 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 GSTCDQ8NEC7 633 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF483Q8TF39 744 aaPredicted RBP15.76■□□□□ 0.11
BRCC3-201ENST00000330045 KBTBD7Q8WVZ9 684 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 FAM149B1Q96BN6 582 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 TSC22D3Q99576 134 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 EIF2AQ9BY44 585 aaKnown RBP15.76■□□□□ 0.11
BRCC3-201ENST00000330045 DNAJC28Q9NX36 388 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 DDX43Q9NXZ2 648 aaKnown RBP15.76■□□□□ 0.11
BRCC3-201ENST00000330045 IL1RAPL1Q9NZN1 696 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PPM1HQ9ULR3 514 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 SLC45A1Q9Y2W3 748 aa15.76■□□□□ 0.11
BRCC3-201ENST00000330045 PPP1R12AO14974 1030 aaPredicted RBP15.75■□□□□ 0.11
BRCC3-201ENST00000330045 GP5P40197 560 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 MLH1P40692 756 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 GARSP41250 739 aaKnown RBP15.75■□□□□ 0.11
BRCC3-201ENST00000330045 CACNA2D1P54289 1103 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 PDK1Q15118 436 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 CES3Q6UWW8 571 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 RASAL3Q86YV0 1011 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 PSTKQ8IV42 348 aaKnown RBP15.75■□□□□ 0.11
BRCC3-201ENST00000330045 SLC2A14Q8TDB8 520 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 RNF139Q8WU17 664 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 MAML3Q96JK9 1138 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 ZIC5Q96T25 663 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 UNCXA6NJT0 531 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 RALBP11234 206 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 MYL4P12829 197 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 MX2P20592 715 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 CRABP2P29373 138 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 ABCE1P61221 599 aaKnown RBP15.75■□□□□ 0.11
BRCC3-201ENST00000330045 GRB14Q14449 540 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 FBXO47Q5MNV8 452 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 RNF220Q5VTB9 566 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 AAGABQ6PD74 315 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 RSPH3Q86UC2 560 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF567Q8N184 647 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 NME8Q8N427 588 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 NDRG1Q92597 394 aaKnown RBP15.75■□□□□ 0.11
BRCC3-201ENST00000330045 CERS2Q96G23 380 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 NR1H4Q96RI1 486 aaPredicted RBP15.75■□□□□ 0.11
BRCC3-201ENST00000330045 PARK7Q99497 189 aaKnown RBP15.75■□□□□ 0.11
BRCC3-201ENST00000330045 ECSITQ9BQ95 431 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 SNX25Q9H3E2 840 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 PRDM12Q9H4Q4 367 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 TMPRSS4Q9NRS4 437 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 SPATS2LQ9NUQ6 558 aaKnown RBP15.75■□□□□ 0.11
BRCC3-201ENST00000330045 RPS6KL1Q9Y6S9 549 aa15.75■□□□□ 0.11
BRCC3-201ENST00000330045 CREB3O43889 395 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms