RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SPATA13Q96N96 652 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 MARCH2Q9P0N8 246 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 PCDHB5Q9Y5E4 795 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 SPAG6O75602 509 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 SUPT7LO94864 414 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 MT-CYBP00156 380 aaPredicted RBP16.42■□□□□ 0.22
SYNM-201ENST00000328642 CHRM3P20309 590 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 YWHAQP27348 245 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 CCND3P30281 292 aaPredicted RBP16.42■□□□□ 0.22
SYNM-201ENST00000328642 CDC25CP30307 473 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 CXCR3P49682 368 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 HDAC4P56524 1084 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 NFE2Q16621 373 aaPredicted RBP16.42■□□□□ 0.22
SYNM-201ENST00000328642 CDCA2Q69YH5 1023 aaPredicted RBP16.42■□□□□ 0.22
SYNM-201ENST00000328642 TRABD2AQ86V40 505 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 LGI2Q8N0V4 545 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 ARRDC4Q8NCT1 418 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 DBF4BQ8NFT6 615 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 NDNQ99608 321 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 SYBUQ9NX95 663 aa16.42■□□□□ 0.22
SYNM-201ENST00000328642 MEI4A8MW99 385 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 NRP1O14786 923 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 ZMPSTE24O75844 475 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 BEST1O76090 585 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 MBL2P11226 248 aaPredicted RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 MMP13P45452 471 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 SERPINB9P50453 376 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 SGO1Q5FBB7 561 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 RNASEH2BQ5TBB1 312 aaKnown RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 C15orf39Q6ZRI6 1047 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.41■□□□□ 0.22
SYNM-201ENST00000328642 IFNL1Q8IU54 200 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 FUKQ8N0W3 1084 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 CKAP2Q8WWK9 683 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 AGO3Q9H9G7 860 aaKnown RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 PIDD1Q9HB75 910 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 A0A096LPK6 155 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 NDUFS3O75489 264 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 LYPLA1O75608 230 aaPredicted RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 TAC1P20366 129 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 IL1RL1Q01638 556 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 ACAP1Q15027 740 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 ISLR2Q6UXK2 745 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 LDB1Q86U70 411 aaPredicted RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 SCG3Q8WXD2 468 aaKnown RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 MFSD3Q96ES6 412 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 COL22A1Q8NFW1 1626 aaPredicted RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 ANKRD12Q6UB98 2062 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 TPP1O14773 563 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 HADHBP55084 474 aaKnown RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 MGAT5Q09328 741 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 NOMO2Q5JPE7 1267 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 ICE2Q659A1 982 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 TMC7Q7Z402 723 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 MPP5Q8N3R9 675 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 CD101Q93033 1021 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 GCNAQ96QF7 691 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 MYLK2Q9H1R3 596 aa16.41■□□□□ 0.22
SYNM-201ENST00000328642 NOP53Q9NZM5 478 aaKnown RBP16.41■□□□□ 0.22
SYNM-201ENST00000328642 PFDN6O15212 129 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 TOP3BO95985 862 aaKnown RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 PDAP1Q13442 181 aaKnown RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 CNGA3Q16281 694 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 SLC25A52Q3SY17 297 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 ACAD11Q709F0 780 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 FRA10AC1Q70Z53 315 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 ZNF572Q7Z3I7 529 aaPredicted RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 KCNMB4Q86W47 210 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 ZDHHC17Q8IUH5 632 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 EIF1ADQ8N9N8 165 aaKnown RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 ZIC5Q96T25 663 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 ARHGEF4Q9NR80 690 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 FLRT1Q9NZU1 646 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 ADAMTSL1Q8N6G6 1762 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 DOCK2Q92608 1830 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 ERI2A8K979 691 aaKnown RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 F5H5T6 163 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 XPO1O14980 1071 aaKnown RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 ZBTB24O43167 697 aaPredicted RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 PLD1Q13393 1074 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 LDLRAD1Q5T700 205 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 TPGS1Q6ZTW0 290 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 TP53INP2Q8IXH6 220 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 DDI1Q8WTU0 396 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 SEPT8Q92599 483 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 YME1L1Q96TA2 773 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 NOD2Q9HC29 1040 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 LATS2Q9NRM7 1088 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 MOSPD1Q9UJG1 213 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 SOCS7O14512 581 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 RALBP11234 206 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 PGGT1BP53609 377 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 FKBP1BP68106 108 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 GRB14Q14449 540 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 FBXO48Q5FWF7 155 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 RNF219Q5W0B1 726 aaPredicted RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 ATP6V0D2Q8N8Y2 350 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms