RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SYCP2LQ5T4T6 812 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 FAXCQ5TGI0 409 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 ZDHHC20Q5W0Z9 365 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 KCNT2Q6UVM3 1135 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 STK32AQ8WU08 396 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 ATXN2LQ8WWM7 1075 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 ERP27Q96DN0 273 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PHTF1Q9UMS5 762 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 IFNA14P01570 189 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PBX1P40424 430 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 SNRPD1P62314 119 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 C6orf10Q5SRN2 563 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 SEL1L3Q68CR1 1132 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PRMT9Q6P2P2 845 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PIGZQ86VD9 579 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 LNX1Q8TBB1 728 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 KLC4Q9NSK0 619 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 OR12D3Q9UGF7 316 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 DDX20Q9UHI6 824 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 USP17L7P0C7H9 530 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 COL6A1P12109 1028 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 AMPD1P23109 780 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 CCND1P24385 295 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PTPN7P35236 360 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 CAPRIN2Q6IMN6 1127 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 LCA5Q86VQ0 697 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 HIPK4Q8NE63 616 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 ZSWIM2Q8NEG5 633 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PDGFDQ9GZP0 370 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 ALG13Q9NP73 1137 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 EVA1BQ9NVM1 165 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 FAM50BQ9Y247 325 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 SERPINE1P05121 402 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PPIGQ13427 754 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■■□ 22.3
COL4A5-201ENST00000328300 PEX6Q13608 980 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 TMC3Q7Z5M5 1100 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 RNF157Q96PX1 679 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 TFR2Q9UP52 801 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 NFKBIEO00221 500 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 CD52P31358 61 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 SERPINH1P50454 418 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 SULT2A1Q06520 285 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 SRLQ86TD4 932 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 HEXDCQ8WVB3 486 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 MCCC1Q96RQ3 725 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 WDR41Q9HAD4 459 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 EFCAB1Q9HAE3 211 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 KRCC1Q9NPI7 259 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 TNPO3Q9Y5L0 923 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 AP5Z1O43299 807 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 SUPT7LO94864 414 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PIGRP01833 764 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PTP4A2Q12974 167 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 MREGQ8N565 214 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 AENQ8WTP8 325 aaKnown RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 ZNF556Q9HAH1 456 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-201ENST00000328300 CICQ96RK0 1608 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 DYRK3O43781 588 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 GLUD2P49448 558 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 KDSRQ06136 332 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 C2CD6Q53TS8 623 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 EPS8L3Q8TE67 593 aaKnown RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 HES6Q96HZ4 224 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 TTPALQ9BTX7 342 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 ETNK2Q9NVF9 386 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 VPS51Q9UID3 782 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 DDHD2O94830 711 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 RXRGP48443 463 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 CSE1LP55060 971 aaKnown RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 PRKCQQ04759 706 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 CREG2Q8IUH2 290 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 ALLCQ8N6M5 410 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 CASP10Q92851 521 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 OSBPL1AQ9BXW6 950 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 BMP10O95393 424 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 ALOX15P16050 662 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 ELK3P41970 407 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 SKP1P63208 163 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 SGCGQ13326 291 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 ACMSDQ8TDX5 336 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 FSCN2O14926 492 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 OCA2Q04671 838 aa11.66□□□□□ -0.54
COL4A5-201ENST00000328300 PRPF39Q86UA1 669 aaKnown RBP11.66□□□□□ -0.54
COL4A5-201ENST00000328300 LONP2Q86WA8 852 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms