RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TSPYL1Q9H0U9 437 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PCED1AQ9H1Q7 454 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TAS2R14Q9NYV8 317 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 OR12D3Q9UGF7 316 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ATG2AQ2TAZ0 1938 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 F8W8V4 182 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PALMO75781 387 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 GAS8O95995 478 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 GSRP00390 522 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 POLR2EP19388 210 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 GDI1P31150 447 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 STIP1P31948 543 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 HDAC4P56524 1084 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 GNG11P61952 73 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ATP11AP98196 1134 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SLC25A11Q02978 314 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 IL10RBQ08334 325 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 EML3Q32P44 896 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PIK3R6Q5UE93 754 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PPP1R21Q6ZMI0 780 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 RFX8Q6ZV50 586 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 HOOK3Q86VS8 718 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 RFX6Q8HWS3 928 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 GJD3Q8N144 294 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PCDH20Q8N6Y1 951 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 C12orf76Q8N812 135 aaPredicted RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ITFG1Q8TB96 612 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 FAM174AQ8TBP5 190 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 DDI1Q8WTU0 396 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 KHSRPQ92945 711 aaKnown RBP eCLIP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ARHGEF26Q96DR7 871 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 C19orf43Q9BQ61 176 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 FAM83CQ9BQN1 747 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 OSBPL1AQ9BXW6 950 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 FOXP3Q9BZS1 431 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ECT2Q9H8V3 914 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 FBXO10Q9UK96 956 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 FBXL21Q9UKT6 434 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 AGO1Q9UL18 857 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TBC1D30Q9Y2I9 924 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 A0A0A0MRY4 1105 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 MACROD2A1Z1Q3 448 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 LRRD1A4D1F6 860 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ERI2A8K979 691 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TMEM110-MUSTN1A8MSY1 372 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 H0Y626 953 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TULP2O00295 520 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 RNASEH1O60930 286 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SOAT2O75908 522 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 KDELR1P24390 212 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SSTR3P32745 418 aaPredicted RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 FNTAP49354 379 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 DGKGP49619 791 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TNK2Q07912 1038 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SEMA3BQ13214 749 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 AUHQ13825 339 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 DHCR24Q15392 516 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 P3H1Q32P28 736 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 INO80DQ53TQ3 878 aaPredicted RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF569Q5MCW4 686 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 FAM46CQ5VWP2 391 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SPOCD1Q6ZMY3 1216 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 DENND1CQ8IV53 801 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 CCDC50Q8IVM0 306 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 MFN1Q8IWA4 741 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ATPAF2Q8N5M1 289 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ACTRT1Q8TDG2 376 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 CFAP57Q96MR6 1250 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TUBGCP5Q96RT8 1024 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PRMT1Q99873 361 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 BBS2Q9BXC9 721 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 FAM126AQ9BYI3 521 aaPredicted RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PCDH18Q9HCL0 1135 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PCDH10Q9P2E7 1040 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SEPT3Q9UH03 358 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 OBSL1O75147 1896 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 C2CD4DB7Z1M9 353 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 APOC4-APOC2K7ER74 178 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 APOC2P02655 101 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 FYNP06241 537 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 PABPC1P11940 636 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 IGFBP6P24592 240 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CCNCP24863 283 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 RPS9P46781 194 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 RPL26P61254 145 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SARNPP82979 210 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 POLD3Q15054 466 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 CDO1Q16878 200 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 FYB2Q5VWT5 728 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 PAPD7Q5XG87 772 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 KIAA0907Q7Z7F0 614 aaPredicted RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 PCGF5Q86SE9 256 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 REXO1L1PQ8IX06 675 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 PPP1R16AQ96I34 528 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 ZFRQ96KR1 1074 aaKnown RBP5.31□□□□□ -1.56
LRIT3-201ENST00000327908 RNF157Q96PX1 679 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 P2RY13Q9BPV8 354 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 SP110Q9HB58 689 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 GKN1Q9NS71 199 aa5.31□□□□□ -1.56
LRIT3-201ENST00000327908 PIGVQ9NUD9 493 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms