RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CDH9Q9ULB4 789 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 HBS1LQ9Y450 684 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 ERI2A8K979 691 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 TPP1O14773 563 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 ALDOAP04075 364 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 ITGA2BP08514 1039 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 RARBP10826 455 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 GP5P40197 560 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 PURAQ00577 322 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 PPIDQ08752 370 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 FASTKD1Q53R41 847 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 C4orf50Q6ZRC1 276 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 N4BP2L2Q92802 583 aaPredicted RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 CPNE1Q99829 537 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 CEP41Q9BYV8 373 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 LRRC40Q9H9A6 602 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.94■■□□□ 1.26
PNKP-201ENST00000322344 ZFATQ9P243 1243 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 ADAM28Q9UKQ2 775 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 YJEFN3A6XGL0 299 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 AP2A1O95782 977 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 THP07101 528 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 GNAZP19086 355 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 MX2P20592 715 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 PTPN3P26045 913 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 GRTP1Q5TC63 336 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 BSPRYQ5W0U4 402 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 CES4AQ5XG92 561 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 ARHGAP24Q8N264 748 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 RNF169Q8NCN4 708 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 CERS2Q96G23 380 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 PRR11Q96HE9 360 aaPredicted RBP22.93■■□□□ 1.26
PNKP-201ENST00000322344 CHST12Q9NRB3 414 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 FAM105AQ9NUU6 356 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 TRHDEQ9UKU6 1024 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 TRPV2Q9Y5S1 764 aa22.93■■□□□ 1.26
PNKP-201ENST00000322344 C2orf71A6NGG8 1288 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 KPNA6O60684 536 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 LTFP02788 710 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 TPBGLP0DKB5 382 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 GM2AP17900 193 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 PDE1BQ01064 536 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 PDE1CQ14123 709 aaPredicted RBP22.92■■□□□ 1.26
PNKP-201ENST00000322344 N4BP2L1Q5TBK1 243 aaPredicted RBP22.92■■□□□ 1.26
PNKP-201ENST00000322344 DSTYKQ6XUX3 929 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 ALYREFQ86V81 257 aaKnown RBP22.92■■□□□ 1.26
PNKP-201ENST00000322344 NETO2Q8NC67 525 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 MCUR1Q96AQ8 359 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 PCED1BQ96HM7 432 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 DCLRE1BQ9H816 532 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 NKX1-2Q9UD57 310 aaPredicted RBP22.92■■□□□ 1.26
PNKP-201ENST00000322344 RPS6KL1Q9Y6S9 549 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 FAM72CH0Y354 149 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 PLIN3O60664 434 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 RPSAP08865 295 aaKnown RBP22.92■■□□□ 1.26
PNKP-201ENST00000322344 NCAM1P13591 858 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 AQP5P55064 265 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 CCL14Q16627 93 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 FAM72AQ5TYM5 149 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 FAM72DQ6L9T8 149 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 TTC7BQ86TV6 843 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 FAM72BQ86X60 149 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 GSTCDQ8NEC7 633 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 ZMIZ2Q8NF64 920 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 STN1Q9H668 368 aaKnown RBP22.92■■□□□ 1.26
PNKP-201ENST00000322344 BFARQ9NZS9 450 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 PPARGC1AQ9UBK2 798 aaKnown RBP22.92■■□□□ 1.26
PNKP-201ENST00000322344 EMCNQ9ULC0 261 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 SORCS3Q9UPU3 1222 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 CDY2AQ9Y6F7 541 aa22.92■■□□□ 1.26
PNKP-201ENST00000322344 CAPN14A8MX76 684 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 PCSK1P29120 753 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 RPL9P32969 192 aaKnown RBP22.91■■□□□ 1.26
PNKP-201ENST00000322344 SERPINB6P35237 376 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 MLH1P40692 756 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 RGS2P41220 211 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 HSF5Q4G112 596 aaPredicted RBP22.91■■□□□ 1.26
PNKP-201ENST00000322344 MBLAC2Q68D91 279 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 ITPRIPL1Q6GPH6 555 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 RINLQ6ZS11 566 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 RSPH3Q86UC2 560 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 WDR75Q8IWA0 830 aaKnown RBP22.91■■□□□ 1.26
PNKP-201ENST00000322344 IRGQQ8WZA9 623 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 HDAC11Q96DB2 347 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 SMARCD1Q96GM5 515 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 VAT1Q99536 393 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 EPAS1Q99814 870 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 FAM96AQ9H5X1 160 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 PIH1D1Q9NWS0 290 aaKnown RBP22.91■■□□□ 1.26
PNKP-201ENST00000322344 DDIT4Q9NX09 232 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 TAS2R1Q9NYW7 299 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 MYBPHLA2RUH7 354 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 KCNK1O00180 336 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 CELF2O95319 508 aaKnown RBP22.91■■□□□ 1.26
PNKP-201ENST00000322344 GSRP00390 522 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 ISL2Q96A47 359 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 GAD1Q99259 594 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 CASS4Q9NQ75 786 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 SLC17A6Q9P2U8 582 aa22.91■■□□□ 1.26
PNKP-201ENST00000322344 ST3GAL5Q9UNP4 418 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms