RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RNF157Q96PX1 679 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 DPEP3Q9H4B8 488 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 LRFN2Q9ULH4 789 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 C15orf38-AP3S2A0A0A6YYH1 394 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 NCF1BA6NI72 391 aaPredicted RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 NCF1CA8MVU1 366 aaPredicted RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 STRNO43815 780 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 S100BP04271 92 aaPredicted RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 GFAPP14136 432 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 NCF1P14598 390 aaPredicted RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 BCAT1P54687 386 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 RAB6CQ53S08 254 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 MFSD4BQ5TF39 518 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 ARPINQ7Z6K5 226 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 SPATA2LQ8IUW3 424 aaPredicted RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 NRBF2Q96F24 287 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 GPR20Q99678 358 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 UBE2OQ9C0C9 1292 aaKnown RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 RAB6CQ9H0N0 254 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 CAB39LQ9H9S4 337 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 PALMDQ9NP74 551 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 SPRP35270 261 aaPredicted RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 EIF2B2P49770 351 aaKnown RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 FOLH1Q04609 750 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 CA9Q16790 459 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 BBS12Q6ZW61 710 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 APBA2Q99767 749 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 KLHL25Q9H0H3 589 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 PIF1Q9H611 641 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 TMPRSS4Q9NRS4 437 aa15.62■□□□□ 0.09
VARS2-201ENST00000321897 TMA7Q9Y2S6 64 aaKnown RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 RBMX2Q9Y388 322 aaKnown RBP15.62■□□□□ 0.09
VARS2-201ENST00000321897 RGS20O76081 388 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 BDNFP23560 247 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 YWHAZP63104 245 aaKnown RBP15.61■□□□□ 0.09
VARS2-201ENST00000321897 SLC6A3Q01959 620 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 ZNF484Q5JVG2 852 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 TRMT10BQ6PF06 316 aaKnown RBP15.61■□□□□ 0.09
VARS2-201ENST00000321897 LBX2Q6XYB7 198 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 HPS6Q86YV9 775 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 THEM5Q8N1Q8 247 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 BLOC1S5Q8TDH9 187 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 OMDQ99983 421 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 ADAM7Q9H2U9 754 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 DDX28Q9NUL7 540 aaKnown RBP15.61■□□□□ 0.09
VARS2-201ENST00000321897 ARHGEF38Q9NXL2 777 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 C1orf232A0A0U1RR37 186 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 PPEF2O14830 753 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 OR6B1O95007 311 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 ASMTLO95671 621 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 IRF1P10914 325 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 MGAT5BQ3V5L5 792 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 CXCL17Q6UXB2 119 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 GPR141Q7Z602 305 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 RIOX2Q8IUF8 465 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 TBCBQ99426 244 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 UTP6Q9NYH9 597 aaKnown RBP15.61■□□□□ 0.09
VARS2-201ENST00000321897 ANGPTL3Q9Y5C1 460 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 ANKRD12Q6UB98 2062 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 VAPBO95292 243 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 CD4P01730 458 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 RALBP11234 206 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 DMPKQ09013 629 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 CDC16Q13042 620 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 NEDD8Q15843 81 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 ITPRIPL1Q6GPH6 555 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 TAS1R3Q7RTX0 852 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 SNX32Q86XE0 403 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 PIWIL1Q96J94 861 aaKnown RBP15.61■□□□□ 0.09
VARS2-201ENST00000321897 EIF2AQ9BY44 585 aaKnown RBP15.61■□□□□ 0.09
VARS2-201ENST00000321897 MAGEB5Q9BZ81 275 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 IPO11Q9UI26 975 aaKnown RBP15.61■□□□□ 0.09
VARS2-201ENST00000321897 SNX10Q9Y5X0 201 aa15.61■□□□□ 0.09
VARS2-201ENST00000321897 COL14A1Q05707 1796 aaKnown RBP15.6■□□□□ 0.09
VARS2-201ENST00000321897 PGK1P00558 417 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 OLIG2Q13516 323 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 STILQ15468 1287 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 PPM1JQ5JR12 505 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 CATSPER1Q8NEC5 780 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 GPR152Q8TDT2 470 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 NAT14Q8WUY8 206 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 PHACTR1Q9C0D0 580 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 TXNRD2Q9NNW7 524 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 MYH3P11055 1940 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 USP2O75604 605 aaPredicted RBP15.6■□□□□ 0.09
VARS2-201ENST00000321897 ALDH1A3P47895 512 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 OAZ1P54368 228 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 AQP4P55087 323 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 BST2Q10589 180 aaKnown RBP15.6■□□□□ 0.09
VARS2-201ENST00000321897 MAPK11Q15759 364 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 SV2CQ496J9 727 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 RALGPS1Q5JS13 557 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 BNC2Q6ZN30 1099 aaPredicted RBP15.6■□□□□ 0.09
VARS2-201ENST00000321897 CRYGNQ8WXF5 182 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 RUVBL2Q9Y230 463 aaKnown RBP15.6■□□□□ 0.09
VARS2-201ENST00000321897 ADGRA2Q96PE1 1338 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 GAS2O43903 313 aaKnown RBP15.6■□□□□ 0.09
VARS2-201ENST00000321897 PIRTP0C851 137 aa15.6■□□□□ 0.09
VARS2-201ENST00000321897 ZNF143P52747 638 aaPredicted RBP15.6■□□□□ 0.09
VARS2-201ENST00000321897 CSHL1Q14406 222 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms