RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 RNASEH2AO75792 299 aaKnown RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 CPA3P15088 417 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 DPEP1P16444 411 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 MLH1P40692 756 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 RGS7P49802 495 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 MCCD1P59942 119 aaPredicted RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 GBE1Q04446 702 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 SFSWAPQ12872 951 aaKnown RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 OLIG2Q13516 323 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 APOFQ13790 326 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 TFDP2Q14188 446 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 SLC9A4Q6AI14 798 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 TRNP1Q6NT89 227 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 PACS1Q6VY07 963 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 PODNQ7Z5L7 613 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 GIPC3Q8TF64 312 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 RXFP2Q8WXD0 754 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 LZICQ8WZA0 190 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 NLRP4Q96MN2 994 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 TWNKQ96RR1 684 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 NUF2Q9BZD4 464 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 TMEM39BQ9GZU3 492 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 C20orf96Q9NUD7 363 aaPredicted RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 ADA2Q9NZK5 511 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 PAIP2BQ9ULR5 123 aaKnown RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 HES2Q9Y543 173 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 ARHGEF37A1IGU5 675 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 C7orf72A4D263 438 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 IQCA1LA6NCM1 817 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 APOL1O14791 398 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 XPOTO43592 962 aaKnown RBP9.9□□□□□ -0.83
PTPRA-202ENST00000318266 ATP5BP06576 529 aaKnown RBP9.9□□□□□ -0.83
PTPRA-202ENST00000318266 MPSTP25325 297 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 DPP6P42658 865 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 SERPINB9P50453 376 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 SULT2A1Q06520 285 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 CDK18Q07002 472 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 TAZQ16635 292 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 C1QTNF12Q5T7M4 302 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 POTEHQ6S545 545 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 TDRD5Q8NAT2 981 aaKnown RBP9.9□□□□□ -0.83
PTPRA-202ENST00000318266 RNF169Q8NCN4 708 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 KBTBD7Q8WVZ9 684 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 SERPINI1Q99574 410 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 NPAS2Q99743 824 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 TMEM79Q9BSE2 394 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 RTKNQ9BST9 563 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 TUT1Q9H6E5 874 aaKnown RBP9.9□□□□□ -0.83
PTPRA-202ENST00000318266 ASNSD1Q9NWL6 643 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 MKS1Q9NXB0 559 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 RNF11Q9Y3C5 154 aa9.9□□□□□ -0.83
PTPRA-202ENST00000318266 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 SEC24DO94855 1032 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PRKCGP05129 697 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 ETFBP38117 255 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 NDST2P52849 883 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 ART3Q13508 389 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 BAATQ14032 418 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 IL23RQ5VWK5 629 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 NIPA1Q7RTP0 329 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PATL1Q86TB9 770 aaKnown RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 MCF2L2Q86YR7 1114 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 CLVS1Q8IUQ0 354 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PCDH20Q8N6Y1 951 aaKnown RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 ZBTB8BQ8NAP8 495 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PCDH19Q8TAB3 1148 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 DDI1Q8WTU0 396 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PDCD6IPQ8WUM4 868 aaKnown RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 UNKQ9C0B0 810 aaKnown RBP9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PCDHAC1Q9H158 963 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 TRPV6Q9H1D0 765 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 COQ10BQ9H8M1 238 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PXMP2Q9NR77 195 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 RNF181Q9P0P0 153 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 EBF1Q9UH73 591 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 FIS1Q9Y3D6 152 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PCDHA11Q9Y5I1 949 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 CCDC78A2IDD5 438 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 BTBD19C9JJ37 291 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 CA12O43570 354 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 STBD1O95210 358 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 LTFP02788 710 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 MGAT1P26572 445 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 MAPK10P53779 464 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 IRF9Q00978 393 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 STILQ15468 1287 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 STRIP1Q5VSL9 837 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 CYP2R1Q6VVX0 501 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 SNX31Q8N9S9 440 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 CIB1Q99828 191 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 WDR41Q9HAD4 459 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 THEGQ9P2T0 379 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 SNX13Q9Y5W8 968 aa9.89□□□□□ -0.83
PTPRA-202ENST00000318266 PLOD2O00469 737 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 GRK2P25098 689 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ASPAP45381 313 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 SLC5A3P53794 718 aa9.88□□□□□ -0.83
PTPRA-202ENST00000318266 ACTR2P61160 394 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms