RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 UGT1A9O60656 530 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 GPR32O75388 356 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 SMIM18P0DKX4 95 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 SOX4Q06945 474 aaPredicted RBP19.95■□□□□ 0.78
ZNF554-201ENST00000317243 EFHC1Q5JVL4 640 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 ARPINQ7Z6K5 226 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 PYROXD2Q8N2H3 581 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 PCDH19Q8TAB3 1148 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 E2F7Q96AV8 911 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 PHF12Q96QT6 1004 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 CNPY3Q9BT09 278 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 UGT1A7Q9HAW7 530 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 UGT1A10Q9HAW8 530 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 UGT1A8Q9HAW9 530 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 CYP3A43Q9HB55 503 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 PIH1D1Q9NWS0 290 aaKnown RBP19.95■□□□□ 0.78
ZNF554-201ENST00000317243 KCNK4Q9NYG8 393 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 CIDEBQ9UHD4 219 aa19.95■□□□□ 0.78
ZNF554-201ENST00000317243 MKI67P46013 3256 aaKnown RBP19.94■□□□□ 0.78
ZNF554-201ENST00000317243 KCNN4O15554 427 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 PDE5AO76074 875 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 ADARP55265 1226 aaKnown RBP19.94■□□□□ 0.78
ZNF554-201ENST00000317243 PITX1P78337 314 aaPredicted RBP19.94■□□□□ 0.78
ZNF554-201ENST00000317243 KRT81Q14533 505 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 CCL14Q16627 93 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 DUSP28Q4G0W2 176 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 RALGPS1Q5JS13 557 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 KLC3Q6P597 504 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 GCNAQ96QF7 691 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 TINF2Q9BSI4 451 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 RAB6BQ9NRW1 208 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 TOP3BO95985 862 aaKnown RBP19.94■□□□□ 0.78
ZNF554-201ENST00000317243 TFAP2AP05549 437 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 C6orf222P0C671 652 aaPredicted RBP19.94■□□□□ 0.78
ZNF554-201ENST00000317243 PIM1P11309 404 aaPredicted RBP19.94■□□□□ 0.78
ZNF554-201ENST00000317243 CDK4P11802 303 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 P4HA1P13674 534 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 STIP1P31948 543 aaKnown RBP19.94■□□□□ 0.78
ZNF554-201ENST00000317243 GRM5P41594 1212 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 HDAC4P56524 1084 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 CCNA1P78396 465 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 CTU1Q7Z7A3 348 aaKnown RBP19.94■□□□□ 0.78
ZNF554-201ENST00000317243 CEP70Q8NHQ1 597 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 CATSPER2Q96P56 530 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 ZNF232Q9UNY5 417 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 TEX264Q9Y6I9 313 aa19.94■□□□□ 0.78
ZNF554-201ENST00000317243 SYNJ2BP-COX16A0A087WUM0 186 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 MEIS3P2A8K0S8 358 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 SMIM10L2AP0DMW4 78 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 SMIM10L2BP0DMW5 78 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 ATP6V1B1P15313 513 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 ROR1Q01973 937 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 FOLH1Q04609 750 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 ITGA9Q13797 1035 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 GRAMD1BQ3KR37 738 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 ANKRD20A4Q4UJ75 823 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 SLC26A11Q86WA9 606 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 NUDCD3Q8IVD9 361 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 POU5F2Q8N7G0 328 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 CCDC106Q9BWC9 280 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 C20orf27Q9GZN8 174 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 NDUFA13Q9P0J0 144 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 COX16Q9P0S2 106 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 PCDHGB4Q9UN71 923 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 PCDHGB5Q9Y5G0 923 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 RBM47A0AV96 593 aaKnown RBP19.93■□□□□ 0.78
ZNF554-201ENST00000317243 TREHO43280 583 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 CLPTM1O96005 669 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 SERPINB6P35237 376 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 GBE1Q04446 702 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 TBL3Q12788 808 aaKnown RBP19.93■□□□□ 0.78
ZNF554-201ENST00000317243 SFSWAPQ12872 951 aaKnown RBP19.93■□□□□ 0.78
ZNF554-201ENST00000317243 NOMO1Q15155 1222 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 NADK2Q4G0N4 442 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 PKDCCQ504Y2 493 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 TTC39BQ5VTQ0 682 aaPredicted RBP19.93■□□□□ 0.78
ZNF554-201ENST00000317243 KYAT3Q6YP21 454 aaKnown RBP19.93■□□□□ 0.78
ZNF554-201ENST00000317243 ADGRG6Q86SQ4 1221 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 MAP7D3Q8IWC1 876 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 METTL25Q8N6Q8 603 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 EFCAB3Q8N7B9 438 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 SNX27Q96L92 541 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 RNF157Q96PX1 679 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 EBF4Q9BQW3 602 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 PCDH18Q9HCL0 1135 aa19.93■□□□□ 0.78
ZNF554-201ENST00000317243 CLDN5O00501 218 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 ACAT1P24752 427 aaKnown RBP19.92■□□□□ 0.78
ZNF554-201ENST00000317243 CPOXP36551 454 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 GRIA1P42261 906 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 MRPS5P82675 430 aaKnown RBP19.92■□□□□ 0.78
ZNF554-201ENST00000317243 POU5F1BQ06416 359 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 SLC10A2Q12908 348 aaPredicted RBP19.92■□□□□ 0.78
ZNF554-201ENST00000317243 DGKDQ16760 1214 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 AAGABQ6PD74 315 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 ARRDC4Q8NCT1 418 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.92■□□□□ 0.78
ZNF554-201ENST00000317243 SLC35F5Q8WV83 523 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 PGLYRP2Q96PD5 576 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 GRIP2Q9C0E4 1043 aa19.92■□□□□ 0.78
ZNF554-201ENST00000317243 EPB41L1Q9H4G0 881 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms