RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ARFGAP1Q8N6T3 406 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 EMC1Q8N766 993 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 NIPA2Q8N8Q9 360 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 RNF169Q8NCN4 708 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 HIPK4Q8NE63 616 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 RAET1EQ8TD07 263 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 CCDC124Q96CT7 223 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 KLHL4Q9C0H6 718 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 G3BP2Q9UN86 482 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 MCF2LO15068 1137 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 LRCH4O75427 683 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 PDE5AO76074 875 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 ERBB2P04626 1255 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 P4HA1P13674 534 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 USP4Q13107 963 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 SDCCAG8Q86SQ7 713 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 KLHDC9Q8NEP7 349 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 OR6B3Q8NGW1 331 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 GDPD5Q8WTR4 605 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 HIC2Q96JB3 615 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 FRMD8P1Q9BZ68 369 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 MIS12Q9H081 205 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 CLIC5Q9NZA1 410 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 PCSK1NQ9UHG2 260 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 EFR3BQ9Y2G0 817 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 TTLL3Q9Y4R7 772 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 UGT1A9O60656 530 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 VCLP18206 1134 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 YY1P25490 414 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 CD52P31358 61 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 VEGFBP49765 207 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 MMEL1Q495T6 779 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 JOSD2Q8TAC2 188 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 SPATA18Q8TC71 538 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 FAM210AQ96ND0 272 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 SENP6Q9GZR1 1112 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 UGT1A7Q9HAW7 530 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 UGT1A10Q9HAW8 530 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 UGT1A8Q9HAW9 530 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 TRPV2Q9Y5S1 764 aa17.66■□□□□ 0.42
SCAMP4-201ENST00000316097 PTGESO14684 152 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 SPAG6O75602 509 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 RFPL1O75677 317 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 LSM8O95777 96 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 KRT7P08729 469 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 MLH1P40692 756 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 RGS7P49802 495 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 IRX4P78413 519 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 TAP1Q03518 808 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 PPP1R26Q5T8A7 1209 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 NT5DC4Q86YG4 428 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 FAF2Q96CS3 445 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 CYP3A43Q9HB55 503 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 MIOSQ9NXC5 875 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 TSPAN16Q9UKR8 245 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 SDR42E2A6NKP2 422 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 PGM3O95394 542 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 C1QAP02745 245 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 CCNIQ14094 377 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 MAP7Q14244 749 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 TRIP10Q15642 601 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 NPNTQ6UXI9 565 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 PIWIL1Q96J94 861 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 MPP4Q96JB8 637 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 GAD1Q99259 594 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 NT5C1AQ9BXI3 368 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 SHCBP1LQ9BZQ2 653 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 PREBQ9HCU5 417 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 UBQLN1Q9UMX0 589 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 SCN10AQ9Y5Y9 1956 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 MED7O43513 233 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 MGEA5O60502 916 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 SNNO75324 88 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 STK10O94804 968 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 TOP3BO95985 862 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 AOC1P19801 751 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 GPD2P43304 727 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 PSMC1P62191 440 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 STX3Q13277 289 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 ITGA7Q13683 1181 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 GRM2Q14416 872 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 PDK3Q15120 406 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 PCBP1Q15365 356 aaKnown RBP eCLIP17.65■□□□□ 0.424e-8■■■■■ 36.4
SCAMP4-201ENST00000316097 TAF5Q15542 800 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 HADHQ16836 314 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 DARS2Q6PI48 645 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 KCTD6Q8NC69 237 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 HSPH1Q92598 858 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 CALN1Q9BXU9 219 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 CYP4F11Q9HBI6 524 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 TMCO1Q9UM00 188 aa17.65■□□□□ 0.42
SCAMP4-201ENST00000316097 APOC4-APOC2K7ER74 178 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 PIRO00625 290 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 GRAP2O75791 330 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 APOC2P02655 101 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 CDH5P33151 784 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 SERPINB6P35237 376 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 INCA1Q0VD86 236 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 KCNJ11Q14654 390 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms