RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 LTFP02788 710 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 UBTFL6P0CB48 400 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 CCNB1P14635 433 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 DESP17661 470 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 ARL4AP40617 200 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 SLC5A3P53794 718 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 DAOAP59103 153 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 USP46P62068 366 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 IRX4P78413 519 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 BLMHQ13867 455 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 TFDP2Q14188 446 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 RCN2Q14257 317 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 SEPT7Q16181 437 aaKnown RBP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 LRRC36Q1X8D7 754 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 NOMO2Q5JPE7 1267 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 NCBP2-AS2Q69YL0 99 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 PPP1R21Q6ZMI0 780 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 SPATA2LQ8IUW3 424 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 CTAGE3PQ8IX95 158 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 NPWQ8N729 165 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 USP33Q8TEY7 942 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 DIS3LQ8TF46 1054 aaKnown RBP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 STK32AQ8WU08 396 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 RNF139Q8WU17 664 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 WDR60Q8WVS4 1066 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 SMARCD1Q96GM5 515 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 C11orf84Q9BUA3 381 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 TXLNGQ9NUQ3 528 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 OR12D3Q9UGF7 316 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 DRG1Q9Y295 367 aaKnown RBP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 SCN10AQ9Y5Y9 1956 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 TRPM7Q96QT4 1865 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 KBTBD13C9JR72 458 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PPP1R12AO14974 1030 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 UGT1A9O60656 530 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF623O75123 536 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ENDOD1O94919 500 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ZCCHC18P0CG32 403 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 VAV1P15498 845 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 GNAZP19086 355 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CALB2P22676 271 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PCSK1P29120 753 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SERPINB3P29508 390 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 GBP1P32455 592 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 POLE2P56282 527 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SESN2P58004 480 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ZBTB16Q05516 673 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 IRF5Q13568 498 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PPP2R5DQ14738 602 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ACAP1Q15027 740 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 INTS6LQ5JSJ4 861 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PRSS55Q6UWB4 352 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 RSPO2Q6UXX9 243 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SYDE1Q6ZW31 735 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CENPUQ71F23 418 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 LIMS2Q7Z4I7 341 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 MRPL10Q7Z7H8 261 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PRPF39Q86UA1 669 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SPNS2Q8IVW8 549 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PPIL6Q8IXY8 311 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PDCD7Q8N8D1 485 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 GBP7Q8N8V2 638 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 NAT8LQ8N9F0 302 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 TTC13Q8NBP0 860 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 TCP10LQ8TDR4 215 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 C10orf82Q8WW14 230 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 NRG4Q8WWG1 115 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PGBD4Q96DM1 585 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SEPT5Q99719 369 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 MECRQ9BV79 373 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 COLEC11Q9BWP8 271 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SHCBP1LQ9BZQ2 653 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PRDM12Q9H4Q4 367 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 UGT1A7Q9HAW7 530 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 UGT1A10Q9HAW8 530 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 UGT1A8Q9HAW9 530 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 NMRK1Q9NWW6 199 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 OSER1Q9NX31 292 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 MPP6Q9NZW5 540 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 KANSL3Q9P2N6 904 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 HEY2Q9UBP5 337 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 FZD10Q9ULW2 581 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 USH1CQ9Y6N9 552 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 MYO18AQ92614 2054 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CLUHO75153 1309 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CEP290O15078 2479 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 HHLA1C9JL84 531 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ARVCFO00192 962 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SMAPO00193 183 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 EEF2KO00418 725 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ENPP3O14638 875 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 EDF1O60869 148 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 FKTNO75072 461 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 USP1O94782 785 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 TOP3BO95985 862 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 NOS2P35228 1153 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ADRA1BP35368 520 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ACADSBP45954 432 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SNX16P57768 344 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 GRIK3Q13003 919 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms