RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 RRP15Q9Y3B9 282 aaKnown RBP13.8□□□□□ -0.2
RFFL-201ENST00000315249 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 OPLAHO14841 1288 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 PGM1P36871 562 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 GUCA1AP43080 201 aaPredicted RBP13.79□□□□□ -0.2
RFFL-201ENST00000315249 FLOT2Q14254 428 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 TDRD5Q8NAT2 981 aaKnown RBP13.79□□□□□ -0.2
RFFL-201ENST00000315249 MRPL45Q9BRJ2 306 aaKnown RBP13.79□□□□□ -0.2
RFFL-201ENST00000315249 ILKAPQ9H0C8 392 aaPredicted RBP13.79□□□□□ -0.2
RFFL-201ENST00000315249 ATP13A3Q9H7F0 1226 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 GID8Q9NWU2 228 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 CFAP97Q9P2B7 532 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 TMEM120BA0PK00 339 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 LGR5O75473 907 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 FMO4P31512 558 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 CD86P42081 329 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 SH3BP5LQ7L8J4 393 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 CCNJLQ8IV13 435 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 ZYG11BQ9C0D3 744 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 C2CD2Q9Y426 696 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 APODP05090 189 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 OR5B17Q8NGF7 314 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 MCRS1Q96EZ8 462 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 MANSC1Q9H8J5 431 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 DNAJC16Q9Y2G8 782 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 AKAP10O43572 662 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 GRM5P41594 1212 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 CDH17Q12864 832 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 BPIFA1Q9NP55 256 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 MYH2Q9UKX2 1941 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 FZD9O00144 591 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 WDR59Q6PJI9 974 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 SPATA21Q7Z572 469 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 PPCSQ9HAB8 311 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 SH3BP4Q9P0V3 963 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 ADAM21Q9UKJ8 722 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 SEC13P55735 322 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 CNGA2Q16280 664 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 TJAP1Q5JTD0 557 aa13.79□□□□□ -0.2
RFFL-201ENST00000315249 MSL3Q8N5Y2 521 aaKnown RBP13.79□□□□□ -0.2
RFFL-201ENST00000315249 LOC100653049A0A140TA62 436 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 WDR27A2RRH5 827 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 KRT34O76011 436 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 ABCB1P08183 1280 aaPredicted RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 HTR1BP28222 390 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 CCND3P30281 292 aaPredicted RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 TLE2Q04725 743 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 MCL1Q07820 350 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 CYP4X1Q8N118 509 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 MLPHQ9BV36 600 aaPredicted RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 ARHGAP20Q9P2F6 1191 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 OR6C75A6NL08 312 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 TYMPP19971 482 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 ANXA11P50995 505 aaKnown RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 HLA-DQA1Q5Y7H0 255 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 DBF4BQ8NFT6 615 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 CXorf40BQ96DE9 158 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 CCDC126Q96EE4 140 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 SOWAHBA6NEL2 793 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 VAPBO95292 243 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 CLTBP09497 229 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 CLCNKBP51801 687 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 ANKRD52Q8NB46 1076 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 ATAD1Q8NBU5 361 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 PAWRQ96IZ0 340 aaKnown RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 SLIT3O75094 1523 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 NALCNQ8IZF0 1738 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 BUD23O43709 281 aaKnown RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 GNRH1P01148 92 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 UBXN2BQ14CS0 331 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 OR6K2Q8NGY2 324 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 ISCUQ9H1K1 167 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 TRHDEQ9UKU6 1024 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 MED21Q13503 144 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 PPP1R26Q5T8A7 1209 aaPredicted RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 FAM46CQ5VWP2 391 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 TSHZ1Q6ZSZ6 1077 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 KRT78Q8N1N4 520 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 HJURPQ8NCD3 748 aaPredicted RBP13.78□□□□□ -0.2
RFFL-201ENST00000315249 ETNPPLQ8TBG4 499 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 VCPIP1Q96JH7 1222 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 CLDND1Q9NY35 253 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 PCDHA2Q9Y5H9 948 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 UBXN8O00124 270 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 KRT16P08779 473 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 DAB2P98082 770 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 FUT10Q6P4F1 479 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 CNPY4Q8N129 248 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 C3orf20Q8ND61 904 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 MCOLN3Q8TDD5 553 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 KCNV2Q8TDN2 545 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 RUBCNQ92622 972 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 SLC35C1Q96A29 364 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 RPS6KB2Q9UBS0 482 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 VPS51Q9UID3 782 aa13.78□□□□□ -0.2
RFFL-201ENST00000315249 SCOCQ9UIL1 159 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms