RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 ZNF302Q9NR11 478 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 ATP6V1G1O75348 118 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 CA9Q16790 459 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 NT5DC3Q86UY8 548 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 TRNT1Q96Q11 434 aaKnown RBP13.05□□□□□ -0.32
LAMA3-202ENST00000313654 KANSL2Q9H9L4 492 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 NCKIPSDQ9NZQ3 722 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 BHMG1C9JSJ3 638 aaPredicted RBP13.05□□□□□ -0.32
LAMA3-202ENST00000313654 BPNT1O95861 308 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 TMEM132DQ14C87 1099 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 EMC1Q8N766 993 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 EXD2Q9NVH0 621 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 WHRNQ9P202 907 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 FAM240BA0A1B0GVZ2 78 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 ALDH5A1P51649 535 aaPredicted RBP13.05□□□□□ -0.32
LAMA3-202ENST00000313654 CYP4F8P98187 520 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 BRSK2Q8IWQ3 736 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
LAMA3-202ENST00000313654 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
LAMA3-202ENST00000313654 SHOC2Q9UQ13 582 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 GMPPBQ9Y5P6 360 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 RHEBQ15382 184 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 ARHGAP36Q6ZRI8 547 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 CBWD2Q8IUF1 395 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 ZNF540Q8NDQ6 660 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 C15orf38-AP3S2A0A0A6YYH1 394 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 RPL9P32969 192 aaKnown RBP13.05□□□□□ -0.32
LAMA3-202ENST00000313654 NPY2RP49146 381 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 AP3S2P59780 193 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 C11orf24Q96F05 449 aaPredicted RBP13.05□□□□□ -0.32
LAMA3-202ENST00000313654 OSBPL3Q9H4L5 887 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 TMEM51Q9NW97 253 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 MED11Q9P086 117 aa13.05□□□□□ -0.32
LAMA3-202ENST00000313654 IFNA7P01567 189 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 MTSS1LQ765P7 747 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 TBCDQ9BTW9 1192 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 MAU2Q9Y6X3 613 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 KRT33AO76009 404 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 ALDH1A3P47895 512 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 SEMA3FQ13275 785 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 ARHGEF6Q15052 776 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 C12orf66Q96MD2 445 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 SGTAO43765 313 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 LCN1P1Q5VSP4 162 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 RASAL3Q86YV0 1011 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 SRFBP1Q8NEF9 429 aaKnown RBP13.04□□□□□ -0.32
LAMA3-202ENST00000313654 DNAJC1Q96KC8 554 aaKnown RBP13.04□□□□□ -0.32
LAMA3-202ENST00000313654 IFT46Q9NQC8 304 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 GRHL1Q9NZI5 618 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 TTC34A8MYJ7 566 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 CCRL2O00421 344 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 GPD1P21695 349 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 CAV3P56539 151 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 KAT2BQ92831 832 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 LXNQ9BS40 222 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 ZNF225Q9UK10 706 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 SLC16A3O15427 465 aaKnown RBP13.04□□□□□ -0.32
LAMA3-202ENST00000313654 AFF1P51825 1210 aaKnown RBP13.04□□□□□ -0.32
LAMA3-202ENST00000313654 DCAF6Q58WW2 860 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 NAPEPLDQ6IQ20 393 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 OFCC1Q8IZS5 231 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 NDUFAF1Q9Y375 327 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 POLR2EP19388 210 aaKnown RBP13.04□□□□□ -0.32
LAMA3-202ENST00000313654 ZC2HC1CQ53FD0 456 aaPredicted RBP13.04□□□□□ -0.32
LAMA3-202ENST00000313654 KCNK18Q7Z418 384 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 ZNF341Q9BYN7 854 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 DMTF1Q9Y222 760 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 DLG4P78352 724 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 GNA13Q14344 377 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 MCFD2Q8NI22 146 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 ERLEC1Q96DZ1 483 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 TRIM9Q9C026 710 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 ACTR8Q9H981 624 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 BLMP54132 1417 aaPredicted RBP13.04□□□□□ -0.32
LAMA3-202ENST00000313654 USP17L3A6NCW0 530 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 USP17L4A6NCW7 530 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 FDFT1P37268 417 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 USP17L1Q7RTZ2 530 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 WRNIP1Q96S55 665 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 SNX6Q9UNH7 406 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 AK5Q9Y6K8 562 aa13.04□□□□□ -0.32
LAMA3-202ENST00000313654 CUL7Q14999 1698 aa13.03□□□□□ -0.32
LAMA3-202ENST00000313654 RNF123Q5XPI4 1314 aa13.03□□□□□ -0.32
LAMA3-202ENST00000313654 PSMG1O95456 288 aa13.03□□□□□ -0.32
LAMA3-202ENST00000313654 ILF3Q12906 894 aaKnown RBP eCLIP13.03□□□□□ -0.32
LAMA3-202ENST00000313654 STARD3Q14849 445 aa13.03□□□□□ -0.32
LAMA3-202ENST00000313654 SLC18A3Q16572 532 aa13.03□□□□□ -0.32
LAMA3-202ENST00000313654 IRAK1BP1Q5VVH5 260 aa13.03□□□□□ -0.32
LAMA3-202ENST00000313654 TTC7BQ86TV6 843 aa13.03□□□□□ -0.32
LAMA3-202ENST00000313654 ZNF280BQ86YH2 543 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms