RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TP53INP2Q8IXH6 220 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 ARFGAP2Q8N6H7 521 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 ATP6V0D2Q8N8Y2 350 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 TLCD1Q96CP7 247 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 CYP4F11Q9HBI6 524 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 MRPL17Q9NRX2 175 aaKnown RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 MAFFQ9ULX9 164 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 NR2E3Q9Y5X4 410 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 PATJQ8NI35 1801 aa17.21■□□□□ 0.34
CLCF1-201ENST00000312438 COL4A6Q14031 1691 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 SMIM23A6NLE4 172 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 RNF103O00237 685 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 AGTP01019 485 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 TPSB2P20231 275 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 GARSP41250 739 aaKnown RBP17.2■□□□□ 0.34
CLCF1-201ENST00000312438 SLCO1A2P46721 670 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 ALDH1A3P47895 512 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 MAGOHP61326 146 aaKnown RBP17.2■□□□□ 0.34
CLCF1-201ENST00000312438 COG7P83436 770 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 SKOR1P84550 965 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 ZNF33AQ06730 810 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 WASHC5Q12768 1159 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 TPSAB1Q15661 275 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 LONRF1Q17RB8 773 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 FAM182AQ5T1J6 154 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 FAXCQ5TGI0 409 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 UBE2Q1Q7Z7E8 422 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 MIB1Q86YT6 1006 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 BTN2A3PQ96KV6 586 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 VPS37BQ9H9H4 285 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 SEPT10Q9P0V9 454 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 NEU3Q9UQ49 428 aa17.2■□□□□ 0.34
CLCF1-201ENST00000312438 SLC12A8A0AV02 714 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 E9PAM4 449 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 TLR5O60602 858 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 GJB5O95377 273 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 PHBP35232 272 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 SARNPP82979 210 aaKnown RBP17.19■□□□□ 0.34
CLCF1-201ENST00000312438 CDK16Q00536 496 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 RING1Q06587 406 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 DNAJC21Q5F1R6 531 aaKnown RBP17.19■□□□□ 0.34
CLCF1-201ENST00000312438 PID1Q7Z2X4 250 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 ANKMY2Q8IV38 441 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 PALM2Q8IXS6 379 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 ATP11CQ8NB49 1132 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 FBXO36Q8NEA4 188 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 MYRFLQ96LU7 910 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 ZNF512Q96ME7 567 aaPredicted RBP17.19■□□□□ 0.34
CLCF1-201ENST00000312438 VAT1Q99536 393 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLCF1-201ENST00000312438 WASH4PA8MWX3 477 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 ATP2A2P16615 1042 aaKnown RBP17.19■□□□□ 0.34
CLCF1-201ENST00000312438 EN2P19622 333 aaPredicted RBP17.19■□□□□ 0.34
CLCF1-201ENST00000312438 ELF1P32519 619 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 ATP5C1P36542 298 aaKnown RBP17.19■□□□□ 0.34
CLCF1-201ENST00000312438 HTRA4P83105 476 aaPredicted RBP17.19■□□□□ 0.34
CLCF1-201ENST00000312438 FPGSQ05932 587 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 CCDC38Q502W7 563 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 TNFAIP8L3Q5GJ75 292 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 SYCP2LQ5T4T6 812 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 ARTNQ5T4W7 220 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 LRRC31Q6UY01 552 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 C3orf62Q6ZUJ4 267 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 ZNF567Q8N184 647 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 FIBCD1Q8N539 461 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 BADQ92934 168 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 CCSER2Q9H7U1 834 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 FNIP2Q9P278 1114 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 IGSF9Q9P2J2 1179 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 DNMT3LQ9UJW3 386 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 TRHDEQ9UKU6 1024 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 SSX2IPQ9Y2D8 614 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 INSL6Q9Y581 213 aa17.19■□□□□ 0.34
CLCF1-201ENST00000312438 KCNK1O00180 336 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 BANF1O75531 89 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 IGLV3-27P01718 113 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 HMGA1P17096 107 aaKnown RBP17.18■□□□□ 0.34
CLCF1-201ENST00000312438 PTPN3P26045 913 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 ATP5DP30049 168 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 HPDP32754 393 aaPredicted RBP17.18■□□□□ 0.34
CLCF1-201ENST00000312438 GPX6P59796 221 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 CREMQ03060 361 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 TAF12Q16514 161 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 MS4A13Q5J8X5 152 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 PIK3R6Q5UE93 754 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 C14orf80Q86SX3 495 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 CAND1Q86VP6 1230 aaKnown RBP17.18■□□□□ 0.34
CLCF1-201ENST00000312438 CELF6Q96J87 481 aaKnown RBP17.18■□□□□ 0.34
CLCF1-201ENST00000312438 TSGA13Q96PP4 275 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 PPCSQ9HAB8 311 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 PPARGC1AQ9UBK2 798 aaKnown RBP17.18■□□□□ 0.34
CLCF1-201ENST00000312438 HBS1LQ9Y450 684 aaKnown RBP17.18■□□□□ 0.34
CLCF1-201ENST00000312438 TEX264Q9Y6I9 313 aa17.18■□□□□ 0.34
CLCF1-201ENST00000312438 ZNF840PA6NDX5 716 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 LILRB3O75022 631 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 CDH16O75309 829 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 FGF18O76093 207 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms