RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 BCLAF3A2AJT9 711 aaKnown RBP13.96□□□□□ -0.17
CLCN6-201ENST00000312413 FGFR3P22607 806 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 ITGB3BPQ13352 177 aaPredicted RBP13.96□□□□□ -0.17
CLCN6-201ENST00000312413 FGD3Q5JSP0 725 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 ZNF276Q8N554 614 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 BHMTQ93088 406 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 DNAJC18Q9H819 358 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 POLR1BQ9H9Y6 1135 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 ZFYVE1Q9HBF4 777 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 DNPEPQ9ULA0 475 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 AP3M1Q9Y2T2 418 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 H3BMM5 538 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 SEC22BO75396 215 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 PGM3O95394 542 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 TPH1P17752 444 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 WARSP23381 471 aaKnown RBP13.96□□□□□ -0.17
CLCN6-201ENST00000312413 TNFRSF8P28908 595 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 BST2Q10589 180 aaKnown RBP13.96□□□□□ -0.17
CLCN6-201ENST00000312413 INO80DQ53TQ3 878 aaPredicted RBP13.96□□□□□ -0.17
CLCN6-201ENST00000312413 NT5DC1Q5TFE4 455 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 BROXQ5VW32 411 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 CCDC80Q76M96 950 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 ADGRF2Q8IZF7 708 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 PIWIL2Q8TC59 973 aaKnown RBP13.96□□□□□ -0.17
CLCN6-201ENST00000312413 ARHGAP28Q9P2N2 729 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 SNX8Q9Y5X2 465 aa13.96□□□□□ -0.17
CLCN6-201ENST00000312413 LOC100506127A0A0U1RQW1 187 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 DDX3XO00571 662 aaKnown RBP eCLIP13.96□□□□□ -0.18
CLCN6-201ENST00000312413 SPIRE1Q08AE8 756 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 MEA1Q16626 185 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 ZNF513Q8N8E2 541 aaPredicted RBP13.96□□□□□ -0.18
CLCN6-201ENST00000312413 MAGEE2Q8TD90 523 aaPredicted RBP13.96□□□□□ -0.18
CLCN6-201ENST00000312413 FBXO32Q969P5 355 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 CHID1Q9BWS9 393 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 ZNF446Q9NWS9 450 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 AHSPQ9NZD4 102 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 ZNRF3Q9ULT6 936 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 GSTK1Q9Y2Q3 226 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 ACTL7BQ9Y614 415 aa13.96□□□□□ -0.18
CLCN6-201ENST00000312413 CYB561D2O14569 222 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ADCY6O43306 1168 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 B3GAT3O94766 335 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 PIGNO95427 931 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 SEC24AO95486 1093 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ICAM1P05362 532 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 CNPP09543 421 aaKnown RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 CCNA2P20248 432 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 KCNJ2P63252 427 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 RRP1BQ14684 758 aaKnown RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ZNF470Q6ECI4 717 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 DHDDSQ86SQ9 333 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 PCDH20Q8N6Y1 951 aaKnown RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ATG4CQ96DT6 458 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 PLEKHG4BQ96PX9 1271 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 PHACTR1Q9C0D0 580 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 REEP1Q9H902 201 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ENTPD7Q9NQZ7 604 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 TAS2R13Q9NYV9 303 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 CRNNQ9UBG3 495 aaPredicted RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 TFRCP02786 760 aaKnown RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 NR2C2P49116 596 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ZNF268Q14587 947 aaPredicted RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 VPS72Q15906 364 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 MARC1Q5VT66 337 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 IZUMO1Q8IYV9 350 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ZNF606Q8WXB4 792 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 OSBPL6Q9BZF3 934 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ARMC7Q9H6L4 198 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 CORO1CQ9ULV4 474 aaPredicted RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 OVOS2A0A0J9YW53 1432 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 PSMD12O00232 456 aaPredicted RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 RECQL5O94762 991 aaPredicted RBP13.95□□□□□ -0.18
CLCN6-201ENST00000312413 STAG3L1P0CL83 205 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ATP6V1C1P21283 382 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 YWHAQP27348 245 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 CCR1P32246 355 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 STAT5AP42229 794 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 RHOAP61586 193 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 OVOS2Q6IE36 1432 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 TTC7BQ86TV6 843 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ZNF398Q8TD17 642 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 NUDT12Q9BQG2 462 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 SLITRK2Q9H156 845 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 TRHDEQ9UKU6 1024 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ARP10275 920 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 JAK1P23458 1154 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 CEP41Q9BYV8 373 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 POMKQ9H5K3 350 aa13.95□□□□□ -0.18
CLCN6-201ENST00000312413 ENTPD5O75356 428 aa13.94□□□□□ -0.18
CLCN6-201ENST00000312413 UPP2O95045 317 aa13.94□□□□□ -0.18
CLCN6-201ENST00000312413 VAPBO95292 243 aa13.94□□□□□ -0.18
CLCN6-201ENST00000312413 PPP4CP60510 307 aa13.94□□□□□ -0.18
CLCN6-201ENST00000312413 YWHAZP63104 245 aaKnown RBP13.94□□□□□ -0.18
CLCN6-201ENST00000312413 SLC25A3Q00325 362 aa13.94□□□□□ -0.18
CLCN6-201ENST00000312413 PERM1Q5SV97 790 aa13.94□□□□□ -0.18
CLCN6-201ENST00000312413 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
CLCN6-201ENST00000312413 POC5Q8NA72 575 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms