RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 EME1Q96AY2 570 aa9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 DCPSQ96C86 337 aaKnown RBP9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 C1orf74Q96LT6 269 aa9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 SPATA33Q96N06 139 aa9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 MMP19Q99542 508 aa9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 CCDC77Q9BR77 488 aa9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 PDZD7Q9H5P4 517 aa9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 MAN1C1Q9NR34 630 aa9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 CRNNQ9UBG3 495 aaPredicted RBP9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 APPL1Q9UKG1 709 aa9.78□□□□□ -0.84
RBFOX1-201ENST00000311745 FOXO6A8MYZ6 492 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 AQP9O43315 295 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 PSTPIP1O43586 416 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 SPOPO43791 374 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 KLHL41O60662 606 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 CSDE1O75534 798 aaKnown RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 SNAI1O95863 264 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 TBXAS1P24557 533 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 ATP5DP30049 168 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 KRT20P35900 424 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 HADHAP40939 763 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 EIF3BP55884 814 aaKnown RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 SLC25A11Q02978 314 aaKnown RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 COX10Q12887 443 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 SLC29A2Q14542 456 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 PDK3Q15120 406 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 CNGA2Q16280 664 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 C6orf118Q5T5N4 469 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 DENND2CQ68D51 928 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 ITIH5Q86UX2 942 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 ANKLE1Q8NAG6 615 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 EMID1Q96A84 441 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 SLC7A6OSQ96CW6 309 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 SLITRK1Q96PX8 696 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 STX18Q9P2W9 335 aaKnown RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 ZNF212Q9UDV6 495 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 KLHL3Q9UH77 587 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 MAFFQ9ULX9 164 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 ERVK-11Q9UQG0 969 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 F8VP50 259 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 PODXLO00592 558 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 WEE2P0C1S8 567 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 CXCL8P10145 99 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 CPA3P15088 417 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 FGFR4P22455 802 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 GCAP28676 217 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 KRT17Q04695 432 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 MXD4Q14582 209 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 STILQ15468 1287 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 ADRM1Q16186 407 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 TRIM16LQ309B1 348 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 PTPN20Q4JDL3 420 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 RAB6CQ53S08 254 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 SEL1L2Q5TEA6 688 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 TRIM72Q6ZMU5 477 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 ARMCX2Q7L311 632 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 CCDC25Q86WR0 208 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 RHPN2Q8IUC4 686 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 SULF1Q8IWU6 871 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 NIPA2Q8N8Q9 360 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 FAM167AQ96KS9 214 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 PRICKLE1Q96MT3 831 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 FAM161BQ96MY7 647 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 RAB6CQ9H0N0 254 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 ANLNQ9NQW6 1124 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 TXNDC16Q9P2K2 825 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 AK5Q9Y6K8 562 aa9.77□□□□□ -0.85
RBFOX1-201ENST00000311745 INO80B-WBP1J3KQ70 363 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 J3QRK9 145 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 PFKMP08237 780 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 ALAS2P22557 587 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 IL1R2P27930 398 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 PTPN7P35236 360 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 WDR44Q5JSH3 913 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 EFCAB12Q6NXP0 572 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 ACAD11Q709F0 780 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 ELMOD1Q8N336 334 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 CLIP4Q8N3C7 705 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 LZTR1Q8N653 840 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 SHCBP1Q8NEM2 672 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 FEZF2Q8TBJ5 459 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 HCAR2Q8TDS4 363 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 EPS8L3Q8TE67 593 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 INPP5DQ92835 1189 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 FBXL8Q96CD0 374 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 TSNARE1Q96NA8 513 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 HPS4Q9NQG7 708 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 KLHL11Q9NVR0 708 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 WHRNQ9P202 907 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 TNFSF13BQ9Y275 285 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 PABPN1LA6NDY0 278 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 GAS2O43903 313 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 OAS1P00973 400 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 LGALS2P05162 132 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 KRT10P13645 584 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 CREB1P16220 341 aa9.76□□□□□ -0.85
RBFOX1-201ENST00000311745 AMPD1P23109 780 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms