RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 VDRP11473 427 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CLK3P49761 638 aaKnown RBP15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ADARP55265 1226 aaKnown RBP15.79■□□□□ 0.12
HCFC1-201ENST00000310441 PP2D1A8MPX8 630 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CCDC166P0CW27 439 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ME2P23368 584 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 OLR1P78380 273 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ZNHIT3Q15649 155 aaPredicted RBP15.79■□□□□ 0.12
HCFC1-201ENST00000310441 SMYD1Q8NB12 490 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 PIGBQ92521 554 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 APOPT1Q96IL0 206 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CNTRLQ7Z7A1 2325 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 NPTXRO95502 500 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 OR56A5P0C7T3 313 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CKBP12277 381 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 PGAM1P18669 254 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CXCR2P25025 360 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CCNG2Q16589 344 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 VPS28Q9UK41 221 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 HALP42357 657 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 PIK3C3Q8NEB9 887 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 VCPIP1Q96JH7 1222 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ENTPD7Q9NQZ7 604 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ITGA11Q9UKX5 1188 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 HACD1B0YJ81 288 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 AP3D1O14617 1153 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 TRDMT1O14717 391 aaKnown RBP15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CYP11B1P15538 503 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CD151P48509 253 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ELAVL2Q12926 359 aaKnown RBP15.79■□□□□ 0.12
HCFC1-201ENST00000310441 TSC22D1Q15714 1073 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 NACC2Q96BF6 587 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 TBCBQ99426 244 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 MXRA8Q9BRK3 442 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ITGB3P05106 788 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CAMK1Q14012 370 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ZNF484Q5JVG2 852 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 C16orf86Q6ZW13 317 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 LRRC34Q8IZ02 419 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 EPS8L3Q8TE67 593 aaKnown RBP15.79■□□□□ 0.12
HCFC1-201ENST00000310441 PAIP1Q9H074 479 aaKnown RBP15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ERGIC3Q9Y282 383 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 DNAJC16Q9Y2G8 782 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
HCFC1-201ENST00000310441 KPNA6O60684 536 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ATP6V1G2O95670 118 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 NTSP30990 170 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 HMGCS2P54868 508 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ZNF846Q147U1 533 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 ADGRF2Q8IZF7 708 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 GPRC5AQ8NFJ5 357 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 TEKT5Q96M29 485 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CMTM6Q9NX76 183 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 CKLFQ9UBR5 152 aa15.79■□□□□ 0.12
HCFC1-201ENST00000310441 DHRSXQ8N5I4 330 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 EHD3Q9NZN3 535 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 UNC13BO14795 1591 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 PRG2P13727 222 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 FGD3Q5JSP0 725 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 BROXQ5VW32 411 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 TC2NQ8N9U0 490 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 NOL6Q9H6R4 1146 aaKnown RBP15.78■□□□□ 0.12
HCFC1-201ENST00000310441 HAT1O14929 419 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 CBX5P45973 191 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 CACNB3P54284 484 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 GATAD2AQ86YP4 633 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 LZTR1Q8N653 840 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 DNAJC1Q96KC8 554 aaKnown RBP15.78■□□□□ 0.12
HCFC1-201ENST00000310441 USP42Q9H9J4 1324 aaKnown RBP15.78■□□□□ 0.12
HCFC1-201ENST00000310441 LYNP07948 512 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 VBP1P61758 197 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 LPIN1Q14693 890 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 RIPOR1Q6ZS17 1223 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 EIF3MQ7L2H7 374 aaKnown RBP15.78■□□□□ 0.12
HCFC1-201ENST00000310441 CLTCL1P53675 1640 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 STX16-NPEPL1H3BU86 382 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 STX16O14662 325 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 MYBP10242 640 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
HCFC1-201ENST00000310441 TMEM94Q12767 1356 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 ZMYND11Q15326 602 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 ARMCX6Q7L4S7 300 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 DGCR14Q96DF8 476 aaKnown RBP15.78■□□□□ 0.12
HCFC1-201ENST00000310441 OXNAD1Q96HP4 312 aaPredicted RBP15.78■□□□□ 0.12
HCFC1-201ENST00000310441 MTMR12Q9C0I1 747 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 NRDE2Q9H7Z3 1164 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 TMEM138Q9NPI0 162 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 NUDT5Q9UKK9 219 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 MGAT4AQ9UM21 535 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 TNS3Q68CZ2 1445 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 GNRH1P01148 92 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 TLX1P31314 330 aaPredicted RBP15.78■□□□□ 0.12
HCFC1-201ENST00000310441 ALDH9A1P49189 494 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 MOXD1Q6UVY6 613 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 PAGE2Q7Z2X7 111 aa15.78■□□□□ 0.12
HCFC1-201ENST00000310441 SAGE2PA6NJ88 616 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 ENGASEQ8NFI3 743 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 INVSQ9Y283 1065 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 RTN3O95197 1032 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms