RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CLNS1AP54105 237 aaKnown RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 DAOAP59103 153 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 PURAQ00577 322 aaKnown RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 PCBP1Q15365 356 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 CES4AQ5XG92 561 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 NPWQ8N729 165 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 SHCBP1LQ9BZQ2 653 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 ACSS2Q9NR19 701 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 DFFAO00273 331 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 ZBTB24O43167 697 aaPredicted RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 JCHAINP01591 159 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 FYNP06241 537 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 POLBP06746 335 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 SERPINB9P50453 376 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 PGGT1BP53609 377 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 MORN1Q5T089 497 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 MTBPQ96DY7 904 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 NSL1Q96IY1 281 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 PPP1R10Q96QC0 940 aaKnown RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 MIPEPQ99797 713 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 ARL5CA6NH57 179 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 HACD1B0YJ81 288 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 CCDC22O60826 627 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 MOCS2O96007 188 aaPredicted RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 ALDOAP04075 364 aaKnown RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 GM2AP17900 193 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 THPOP40225 353 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 MAGEA3P43357 314 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 MAGEA6P43360 314 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 MRPS6P82932 125 aaKnown RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 CCDC6Q16204 474 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 PARP6Q2NL67 630 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 ARL13BQ3SXY8 428 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 TIGD5Q53EQ6 642 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 HSP90AA5PQ58FG0 334 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 CERCAMQ5T4B2 595 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 TNS4Q8IZW8 715 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 ZMIZ2Q8NF64 920 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 DTX3LQ8TDB6 740 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 INPP5DQ92835 1189 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 MFSD3Q96ES6 412 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 RSRC1Q96IZ7 334 aaKnown RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 AGAP2Q99490 1192 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 EBF4Q9BQW3 602 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 DENND2DQ9H6A0 471 aaPredicted RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 CAB39LQ9H9S4 337 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 OR12D3Q9UGF7 316 aa11.85□□□□□ -0.51
PTPN2-201ENST00000309660 ITGA2BP08514 1039 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 PGAM1P18669 254 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 WLSQ5T9L3 541 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 LRRC8BQ6P9F7 803 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
PTPN2-201ENST00000309660 RSPH3Q86UC2 560 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 SMC1BQ8NDV3 1235 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 GSTCDQ8NEC7 633 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 COLEC11Q9BWP8 271 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 BFARQ9NZS9 450 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 C15orf41Q9Y2V0 281 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 HAS3O00219 553 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 BPGMP07738 259 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 PTPN3P26045 913 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 CD52P31358 61 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 RGS2P41220 211 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 CACNB2Q08289 660 aaPredicted RBP11.84□□□□□ -0.51
PTPN2-201ENST00000309660 PDE1CQ14123 709 aaPredicted RBP11.84□□□□□ -0.51
PTPN2-201ENST00000309660 GDF6Q6KF10 455 aaPredicted RBP11.84□□□□□ -0.51
PTPN2-201ENST00000309660 TRIM42Q8IWZ5 723 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 ZNF398Q8TD17 642 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 ARNTL2Q8WYA1 636 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 MYLPFQ96A32 169 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 CADM1Q9BY67 442 aaKnown RBP11.84□□□□□ -0.51
PTPN2-201ENST00000309660 AGO3Q9H9G7 860 aaKnown RBP11.84□□□□□ -0.51
PTPN2-201ENST00000309660 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 MOCS1Q9NZB8 636 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 VANGL2Q9ULK5 521 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 DNAJC16Q9Y2G8 782 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 B2RBV5 119 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 F8W810 466 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 ITM2AO43736 263 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 NFKB1P19838 968 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 SCNN1AP37088 669 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 DLG2Q15700 870 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 CTC1Q2NKJ3 1217 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 TAF2Q6P1X5 1199 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 RINLQ6ZS11 566 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 STRA8Q7Z7C7 330 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 SCAMP5Q8TAC9 235 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 MAGEC3Q8TD91 643 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 CERS2Q96G23 380 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 CPSF2Q9P2I0 782 aaKnown RBP11.84□□□□□ -0.51
PTPN2-201ENST00000309660 NOD1Q9Y239 953 aa11.84□□□□□ -0.51
PTPN2-201ENST00000309660 LRPAP1P30533 357 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 CRHR1P34998 444 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 LHX1P48742 406 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 UBAP2LQ14157 1087 aaKnown RBP11.83□□□□□ -0.52
PTPN2-201ENST00000309660 SMYD5Q6GMV2 418 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 PPP1R36Q96LQ0 422 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 FCRL3Q96P31 734 aaPredicted RBP11.83□□□□□ -0.52
PTPN2-201ENST00000309660 TMEM209Q96SK2 561 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 BTBD10Q9BSF8 475 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms