RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 ACTL7BQ9Y614 415 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 POLR2AP24928 1970 aaKnown RBP12.99□□□□□ -0.33
RETREG3-201ENST00000309428 LIN7AO14910 233 aaPredicted RBP12.99□□□□□ -0.33
RETREG3-201ENST00000309428 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
RETREG3-201ENST00000309428 CA8P35219 290 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 SDHAF4Q5VUM1 108 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 SNX32Q86XE0 403 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 CCDC185Q8N715 623 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 TASP1Q9H6P5 420 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 ADARB2Q9NS39 739 aaKnown RBP12.99□□□□□ -0.33
RETREG3-201ENST00000309428 ZNF358Q9NW07 568 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 SLC39A10Q9ULF5 831 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 BRWD3Q6RI45 1802 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 CLUHO75153 1309 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 DFFAO00273 331 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 TRUB2O95900 331 aaKnown RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 NCAM1P13591 858 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 EIF4BP23588 611 aaKnown RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 KLRC2P26717 231 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 SLC1A6P48664 564 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 FOLH1Q04609 750 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 PTP4A2Q12974 167 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 ACVR2BQ13705 512 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 LBRQ14739 615 aaKnown RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 SURF1Q15526 300 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 PPM1JQ5JR12 505 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 ACAD11Q709F0 780 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 NUP93Q8N1F7 819 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 ZNF669Q96BR6 464 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 PAIP1Q9H074 479 aaKnown RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 ACSS3Q9H6R3 686 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 LIN28AQ9H9Z2 209 aaKnown RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 PFDN4Q9NQP4 134 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 MTA2O94776 668 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 OAZ1P54368 228 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 CCNA1P78396 465 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 DLG1Q12959 904 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 PDK1Q15118 436 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 CMC1Q7Z7K0 106 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 TTC30AQ86WT1 665 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 PCDH20Q8N6Y1 951 aaKnown RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 EMID1Q96A84 441 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 TRAPPC9Q96Q05 1148 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 RSAD1Q9HA92 442 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 CYLDQ9NQC7 956 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 BARX2Q9UMQ3 279 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 RPS6KL1Q9Y6S9 549 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 GON4LQ3T8J9 2241 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 C15orf38-AP3S2A0A0A6YYH1 394 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 METTL18O95568 372 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 RALBP11234 206 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 VCLP18206 1134 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 MGAT1P26572 445 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 AFF1P51825 1210 aaKnown RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 HADHBP55084 474 aaKnown RBP12.98□□□□□ -0.33
RETREG3-201ENST00000309428 HDAC4P56524 1084 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 PLIN5Q00G26 463 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 LRRC8BQ6P9F7 803 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 ARPINQ7Z6K5 226 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 TREML1Q86YW5 311 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 GPR152Q8TDT2 470 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 CCDC138Q96M89 665 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 CYP4F12Q9HCS2 524 aa12.98□□□□□ -0.33
RETREG3-201ENST00000309428 SAC3D1A6NKF1 404 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 SPTLC1O15269 473 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 FKBP6O75344 327 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 PGK1P00558 417 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 EEF1DP29692 281 aaKnown RBP12.97□□□□□ -0.33
RETREG3-201ENST00000309428 WSCD1Q658N2 575 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 RHBDF2Q6PJF5 856 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.33
RETREG3-201ENST00000309428 BHMTQ93088 406 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 NIFKQ9BYG3 293 aaKnown RBP12.97□□□□□ -0.33
RETREG3-201ENST00000309428 GCOM2Q9BZD3 368 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-201ENST00000309428 PIF1Q9H611 641 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 WDR55Q9H6Y2 383 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-201ENST00000309428 CAB39LQ9H9S4 337 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 TREHO43280 583 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 FGFR1P11362 822 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 CYP3A5P20815 502 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 TNFAIP2Q03169 654 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 CCDC15Q0P6D6 951 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 SPDYAQ5MJ70 313 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 LPCAT2Q7L5N7 544 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 SNX31Q8N9S9 440 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 NRG4Q8WWG1 115 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 TBCBQ99426 244 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 TMEM134Q9H6X4 195 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 RABGEF1Q9UJ41 708 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 A6NHS1 94 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 SORBS2O94875 1100 aaKnown RBP12.97□□□□□ -0.33
RETREG3-201ENST00000309428 CELF2O95319 508 aaKnown RBP12.97□□□□□ -0.33
RETREG3-201ENST00000309428 USP17L7P0C7H9 530 aa12.97□□□□□ -0.33
RETREG3-201ENST00000309428 VDRP11473 427 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms