RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CPSF3Q9UKF6 684 aaKnown RBP11.43□□□□□ -0.58
PTPN7-201ENST00000309017 PCDHGB4Q9UN71 923 aa11.43□□□□□ -0.58
PTPN7-201ENST00000309017 PCDHGB5Q9Y5G0 923 aa11.43□□□□□ -0.58
PTPN7-201ENST00000309017 QSER1Q2KHR3 1735 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 H3BSA7 217 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 VILLO15195 856 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ATG7O95352 703 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 POLBP06746 335 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 GJB1P08034 283 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 SMIM18P0DKX4 95 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 SETSIPP0DME0 302 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 FGFR3P22607 806 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 GP5P40197 560 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 HMGCS2P54868 508 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 IFRD2Q12894 506 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-201ENST00000309017 SNAPC2Q13487 334 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 MPZL3Q6UWV2 235 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 STRA8Q7Z7C7 330 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 MARVELD2Q8N4S9 558 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 FAM156AQ8NDB6 213 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 LGMNQ99538 433 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 HAUS8Q9BT25 410 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ACAD9Q9H845 621 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 SCN9AQ15858 1988 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 SPDYE16A6NNV3 312 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-201ENST00000309017 H3BNX3 289 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 MSCO60682 206 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 USP12O75317 370 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 CSPG5O95196 566 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ITGBL1O95965 494 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ACAT1P24752 427 aaKnown RBP11.42□□□□□ -0.58
PTPN7-201ENST00000309017 GLRBP48167 497 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ADGRE1Q14246 886 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 C4orf22Q6V702 233 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 TMEM192Q8IY95 271 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 CCNYL1Q8N7R7 359 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 HTR3CQ8WXA8 447 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 HPDLQ96IR7 371 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 VPS33BQ9H267 617 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 CAB39LQ9H9S4 337 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 RAB26Q9ULW5 256 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-201ENST00000309017 A0A096LPK6 155 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 SPATA31C2B4DYI2 1134 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 STX16-NPEPL1H3BU86 382 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 TRMUO75648 421 aaKnown RBP11.42□□□□□ -0.58
PTPN7-201ENST00000309017 STAMBPO95630 424 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 TPSB2P20231 275 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ME2P23368 584 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 MPSTP25325 297 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 L1CAMP32004 1257 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 SPRP35270 261 aaPredicted RBP11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ATXN1P54253 815 aaKnown RBP11.42□□□□□ -0.58
PTPN7-201ENST00000309017 IGBP1P78318 339 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 PRAMEP78395 509 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 TPSAB1Q15661 275 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 SEL1L3Q68CR1 1132 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ZFP1Q6P2D0 407 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 TIFABQ6ZNK6 161 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 DCLK2Q8N568 766 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 FAM149B1Q96BN6 582 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 PGLYRP2Q96PD5 576 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 TASP1Q9H6P5 420 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 WDR41Q9HAD4 459 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 TLK1Q9UKI8 766 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 AP4E1Q9UPM8 1137 aa11.42□□□□□ -0.58
PTPN7-201ENST00000309017 ARHGEF37A1IGU5 675 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 RGSL1A5PLK6 1076 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 TRIM13O60858 407 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 PGAM1P18669 254 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 TPP2P29144 1249 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-201ENST00000309017 NR1H2P55055 460 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 TRNP1Q6NT89 227 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 PID1Q7Z2X4 250 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 METTL25Q8N6Q8 603 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 C1orf127Q8N9H9 656 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 PDCD6IPQ8WUM4 868 aaKnown RBP11.41□□□□□ -0.58
PTPN7-201ENST00000309017 SLC4A5Q9BY07 1137 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 MAGEB5Q9BZ81 275 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 SYBUQ9NX95 663 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 CASQ2O14958 399 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-201ENST00000309017 ZFXP17010 805 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-201ENST00000309017 DLG2Q15700 870 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 CCDC153Q494R4 210 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 ZNF534Q76KX8 674 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 LPCAT2Q7L5N7 544 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 NCAPG2Q86XI2 1143 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 MAPK15Q8TD08 544 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 PKP2Q99959 881 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 B3GNT5Q9BYG0 378 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 LIN28AQ9H9Z2 209 aaKnown RBP11.41□□□□□ -0.58
PTPN7-201ENST00000309017 PICK1Q9NRD5 415 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 MOCS1Q9NZB8 636 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 KLHL8Q9P2G9 620 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-201ENST00000309017 PRPF19Q9UMS4 504 aaKnown RBP11.41□□□□□ -0.58
PTPN7-201ENST00000309017 PCDHB12Q9Y5F1 795 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 MAFBQ9Y5Q3 323 aaPredicted RBP11.41□□□□□ -0.58
PTPN7-201ENST00000309017 PDLIM1O00151 329 aa11.41□□□□□ -0.58
PTPN7-201ENST00000309017 CILPO75339 1184 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms