RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 SPATA31D4Q6ZUB0 917 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 BEND5Q7L4P6 421 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 GSTA5Q7RTV2 222 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 JAMLQ86YT9 394 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 GSPT2Q8IYD1 628 aaKnown RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 ZNF75CPQ92670 426 aaPredicted RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 CASP10Q92851 521 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 ABHD8Q96I13 439 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 KCTD15Q96SI1 283 aaPredicted RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 TCF25Q9BQ70 676 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 TKTL2Q9H0I9 626 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 DPH5Q9H2P9 285 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 ENTPD7Q9NQZ7 604 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 IL37Q9NZH6 218 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 FBXW11Q9UKB1 542 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 DNPEPQ9ULA0 475 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 GRXCR1A8MXD5 290 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 MSI1O43347 362 aaKnown RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 CNPP09543 421 aaKnown RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 BTF3P20290 206 aaKnown RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 OTUD4Q01804 1114 aaKnown RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 BYSLQ13895 437 aaKnown RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 SEPT7Q16181 437 aaKnown RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 RASIP1Q5U651 963 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 C1orf228Q6PIY5 440 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 TMCO3Q6UWJ1 677 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 CCNI2Q6ZMN8 369 aaPredicted RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 BBS12Q6ZW61 710 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 SDCCAG8Q86SQ7 713 aaPredicted RBP11.07□□□□□ -0.64
CASP3-201ENST00000308394 ACTL9Q8TC94 416 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 ZNF670Q9BS34 389 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 C17orf80Q9BSJ5 609 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 RAB17Q9H0T7 212 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 MTMR10Q9NXD2 777 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 MKL2Q9ULH7 1088 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 ZNF148Q9UQR1 794 aa11.07□□□□□ -0.64
CASP3-201ENST00000308394 FAM92AA1XBS5 289 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 LINC01553A4QN01 128 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 FAM187AA6NFU0 413 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 APOL1O14791 398 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 LIASO43766 372 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 RARGP13631 454 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 GOT1P17174 413 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 CCNCP24863 283 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 PTGIRP43119 386 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 CARSP49589 748 aaKnown RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 CREMQ03060 361 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 NPNTQ6UXI9 565 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 DDX42Q86XP3 938 aaKnown RBP eCLIP11.06□□□□□ -0.64
CASP3-201ENST00000308394 SPATS2Q86XZ4 545 aaKnown RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 PSTKQ8IV42 348 aaKnown RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 TTC13Q8NBP0 860 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 PCDH19Q8TAB3 1148 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 FAM76AQ8TAV0 307 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 GRK7Q8WTQ7 553 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 P3H4Q92791 437 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 ZNF512Q96ME7 567 aaPredicted RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 ARFGAP3Q9NP61 516 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 ANLNQ9NQW6 1124 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 GDF3Q9NR23 364 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 FNIP2Q9P278 1114 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 YIPF1Q9Y548 306 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 HEY1Q9Y5J3 304 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 PATJQ8NI35 1801 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 DAPK3O43293 454 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 LILRB3O75022 631 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 SEC31AO94979 1220 aaKnown RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 TBX18O95935 607 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 GLULP15104 373 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 MAGEA9P43362 315 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 CXCR3P49682 368 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 AIF1P55008 147 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 ERVFC1P60507 584 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 TWF1Q12792 350 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 EFEMP1Q12805 493 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 MRPL28Q13084 256 aaKnown RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 HLTFQ14527 1009 aaKnown RBP eCLIP11.06□□□□□ -0.64
CASP3-201ENST00000308394 TRIP13Q15645 432 aaPredicted RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 CLPPQ16740 277 aaPredicted RBP11.06□□□□□ -0.64
CASP3-201ENST00000308394 LRRC49Q8IUZ0 686 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 TMCO5AQ8N6Q1 288 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 CASKIN2Q8WXE0 1202 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 RUBCNQ92622 972 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 NTAN1Q96AB6 310 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 CSPG4P5Q96PW8 444 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 ERP44Q9BS26 406 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 SMOC2Q9H3U7 446 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 HSFX1Q9UBD0 423 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 NFU1Q9UMS0 254 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
CASP3-201ENST00000308394 APOC4-APOC2K7ER74 178 aa11.05□□□□□ -0.64
CASP3-201ENST00000308394 IRAK2O43187 625 aa11.05□□□□□ -0.64
CASP3-201ENST00000308394 GAS8O95995 478 aa11.05□□□□□ -0.64
CASP3-201ENST00000308394 APOC2P02655 101 aa11.05□□□□□ -0.64
CASP3-201ENST00000308394 CSH1P0DML2 217 aa11.05□□□□□ -0.64
CASP3-201ENST00000308394 CSH2P0DML3 217 aa11.05□□□□□ -0.64
CASP3-201ENST00000308394 KLRC2P26717 231 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms