RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 PTPN20Q4JDL3 420 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 ATF7IP2Q5U623 682 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 ZBTB8OSQ8IWT0 167 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 KIAA0319LQ8IZA0 1049 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 ZNF786Q8N393 782 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 PCDH20Q8N6Y1 951 aaKnown RBP18.37■□□□□ 0.53
RETREG1-201ENST00000306320 SLC35B2Q8TB61 432 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 DCPSQ96C86 337 aaKnown RBP18.37■□□□□ 0.53
RETREG1-201ENST00000306320 FBXL8Q96CD0 374 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 HEXIM2Q96MH2 286 aaKnown RBP18.37■□□□□ 0.53
RETREG1-201ENST00000306320 KCNK16Q96T55 309 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 MAGEB5Q9BZ81 275 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 CNTN3Q9P232 1028 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 GPR25O00155 361 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 TPP1O14773 563 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 RFPL1O75677 317 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 MT-CO1P00395 513 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 ADORA2AP29274 412 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 TYK2P29597 1187 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 IDH3AP50213 366 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 FAM160B1Q5W0V3 765 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 TMEM35BQ8NCS4 154 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 PIWIL1Q96J94 861 aaKnown RBP18.37■□□□□ 0.53
RETREG1-201ENST00000306320 ACO2Q99798 780 aaKnown RBP18.37■□□□□ 0.53
RETREG1-201ENST00000306320 FAM49BQ9NUQ9 324 aa18.37■□□□□ 0.53
RETREG1-201ENST00000306320 SF3B1O75533 1304 aaKnown RBP eCLIP18.37■□□□□ 0.53
RETREG1-201ENST00000306320 ZNFX1Q9P2E3 1918 aaKnown RBP18.37■□□□□ 0.53
RETREG1-201ENST00000306320 FER1L6Q2WGJ9 1857 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 YWHAZP63104 245 aaKnown RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 GHRHRQ02643 423 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 SLC18A2Q05940 514 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 NKD2Q969F2 451 aaPredicted RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 RCN3Q96D15 328 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 SENP6Q9GZR1 1112 aaPredicted RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 PPCSQ9HAB8 311 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 SSU72Q9NP77 194 aaKnown RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 RNF181Q9P0P0 153 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 ADAMTS5Q9UNA0 930 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 ATP9BO43861 1147 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 KDELR1P24390 212 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 KCTD2Q14681 263 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 C15orf59Q2T9L4 293 aaPredicted RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 ANO4Q32M45 955 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 ATP2A3Q93084 1043 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 CPXM1Q96SM3 734 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 MRPS26Q9BYN8 205 aaKnown RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 MRPL42Q9Y6G3 142 aaKnown RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 NFASCO94856 1347 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 ZBTB14O43829 449 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 LRCH4O75427 683 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 KPNA1P52294 538 aaPredicted RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 SNRPFP62306 86 aaKnown RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 SLC9B1Q4ZJI4 515 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 SLC9A4Q6AI14 798 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 KYAT3Q6YP21 454 aaKnown RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 ENOSF1Q7L5Y1 443 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 ATP6V1E2Q96A05 226 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 ABHD8Q96I13 439 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 CIB1Q99828 191 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 NUF2Q9BZD4 464 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 SDCBP2Q9H190 292 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 TRNAU1APQ9NX07 287 aaKnown RBP18.36■□□□□ 0.53
RETREG1-201ENST00000306320 EBF1Q9UH73 591 aa18.36■□□□□ 0.53
RETREG1-201ENST00000306320 SYNJ2BP-COX16A0A087WUM0 186 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 ASS1P00966 412 aaKnown RBP18.35■□□□□ 0.53
RETREG1-201ENST00000306320 VARSP26640 1264 aaKnown RBP18.35■□□□□ 0.53
RETREG1-201ENST00000306320 CSE1LP55060 971 aaKnown RBP18.35■□□□□ 0.53
RETREG1-201ENST00000306320 MTTPP55157 894 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 PTP4A2Q12974 167 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 SNAPC2Q13487 334 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 HNRNPDQ14103 355 aaKnown RBP18.35■□□□□ 0.53
RETREG1-201ENST00000306320 XRRA1Q6P2D8 792 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 ADGRF2Q8IZF7 708 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 C7orf31Q8N865 590 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 JADE3Q92613 823 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 COX16Q9P0S2 106 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 M0QYV0 167 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 ALOX15P16050 662 aaPredicted RBP18.35■□□□□ 0.53
RETREG1-201ENST00000306320 CDH2P19022 906 aaPredicted RBP18.35■□□□□ 0.53
RETREG1-201ENST00000306320 MMP8P22894 467 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 GLRBP48167 497 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 LDLRAP1Q5SW96 308 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 UNC5AQ6ZN44 842 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 NCCRP1Q6ZVX7 275 aaPredicted RBP18.35■□□□□ 0.53
RETREG1-201ENST00000306320 ZNF410Q86VK4 478 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 BRSK2Q8IWQ3 736 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 ZNF781Q8N8C0 355 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 OR52B2Q96RD2 323 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 GPR20Q99678 358 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 NIF3L1Q9GZT8 377 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 PCDHAC1Q9H158 963 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 COG4Q9H9E3 785 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 PSMD13Q9UNM6 376 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 TTLL3Q9Y4R7 772 aa18.35■□□□□ 0.53
RETREG1-201ENST00000306320 LACTBL1A8MY62 500 aa18.34■□□□□ 0.53
RETREG1-201ENST00000306320 H3BNX3 289 aa18.34■□□□□ 0.53
RETREG1-201ENST00000306320 GOLGA8TH3BQL2 631 aa18.34■□□□□ 0.53
RETREG1-201ENST00000306320 CLIC3O95833 236 aa18.34■□□□□ 0.53
RETREG1-201ENST00000306320 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
RETREG1-201ENST00000306320 TNNC2P02585 160 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms