RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 SLC13A1Q9BZW2 595 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 CRISPLD1Q9H336 500 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 ABCF3Q9NUQ8 709 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 SYBUQ9NX95 663 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 DNM1LO00429 736 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 SNX3O60493 162 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 STK10O94804 968 aaKnown RBP11.7□□□□□ -0.54
SCG2-201ENST00000305409 APOEP02649 317 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 TYMPP19971 482 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 GBP2P32456 591 aaPredicted RBP11.7□□□□□ -0.54
SCG2-201ENST00000305409 CD68P34810 354 aaPredicted RBP11.7□□□□□ -0.54
SCG2-201ENST00000305409 MAGEA3P43357 314 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 GLUD2P49448 558 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 IL9RQ01113 521 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 NR1H3Q13133 447 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 CDHR3Q6ZTQ4 885 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 KDELC2Q7Z4H8 507 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 TMCO2Q7Z6W1 182 aaPredicted RBP11.7□□□□□ -0.54
SCG2-201ENST00000305409 LRRC6Q86X45 466 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 PGAP3Q96FM1 320 aaPredicted RBP11.7□□□□□ -0.54
SCG2-201ENST00000305409 FCRL2Q96LA5 508 aaPredicted RBP11.7□□□□□ -0.54
SCG2-201ENST00000305409 MAGEB18Q96M61 343 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 PHACTR1Q9C0D0 580 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.54
SCG2-201ENST00000305409 GMIPQ9P107 970 aa11.7□□□□□ -0.54
SCG2-201ENST00000305409 IRAK2O43187 625 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 OPHN1O60890 802 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 FKTNO75072 461 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 F9P00740 461 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 RPL17P18621 184 aaKnown RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 TPSB2P20231 275 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 SLC11A1P49279 550 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 TPSAB1Q15661 275 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 MAPRE1Q15691 268 aaKnown RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 SEPT7Q16181 437 aaKnown RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 PRSS55Q6UWB4 352 aaPredicted RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 MIB1Q86YT6 1006 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 FAM126BQ8IXS8 530 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 STAMBPL1Q96FJ0 436 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 CASD1Q96PB1 797 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 FAM111AQ96PZ2 611 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 SEPT5Q99719 369 aaPredicted RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 TSEN34Q9BSV6 310 aaKnown RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 PITPNM3Q9BZ71 974 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 ZCWPW1Q9H0M4 648 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 SQORQ9Y6N5 450 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 CAPN7Q9Y6W3 813 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 CASP8AP2Q9UKL3 1982 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 TBKBP1A7MCY6 615 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 PRPF4O43172 522 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCG2-201ENST00000305409 CPB1P15086 417 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 NFKB1P19838 968 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 GARSP41250 739 aaKnown RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 ABCG1P45844 678 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 APLP1P51693 650 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 IRX4P78413 519 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 EFEMP1Q12805 493 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 RTP2Q5QGT7 225 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 TFAP2DQ7Z6R9 452 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 SLC26A11Q86WA9 606 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 BANPQ8N9N5 519 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 SLAIN1Q8ND83 568 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 GIPC2Q8TF65 315 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 ARNTL2Q8WYA1 636 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 IRGQQ8WZA9 623 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 ZNF419Q96HQ0 510 aaPredicted RBP11.69□□□□□ -0.54
SCG2-201ENST00000305409 SGSM3Q96HU1 749 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 ABCC13Q9NSE7 274 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 TMEM161AQ9NX61 479 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 ADAM28Q9UKQ2 775 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 LRFN2Q9ULH4 789 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 TSC2P49815 1807 aa11.69□□□□□ -0.54
SCG2-201ENST00000305409 IQANK1A0A1B0GTG1 560 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 C2CD2LO14523 706 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 ATP9BO43861 1147 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 LPXNO60711 386 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 OAZ2O95190 189 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 ERVK-10P10266 1014 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 FDFT1P37268 417 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 OVGP1Q12889 678 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 PPP2R5DQ14738 602 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 PARP6Q2NL67 630 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 MGAT5BQ3V5L5 792 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 CCDC63Q8NA47 563 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 SPATA22Q8NHS9 363 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 GSDMBQ8TAX9 411 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 BCL7CQ8WUZ0 217 aaPredicted RBP11.68□□□□□ -0.54
SCG2-201ENST00000305409 PTPRN2Q92932 1015 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 TTC17Q96AE7 1141 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 ATXN7L3BQ96GX2 97 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 OXNAD1Q96HP4 312 aaPredicted RBP11.68□□□□□ -0.54
SCG2-201ENST00000305409 NSRP1Q9H0G5 558 aaKnown RBP11.68□□□□□ -0.54
SCG2-201ENST00000305409 MARCH5Q9NX47 278 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 SMG5Q9UPR3 1016 aaKnown RBP11.68□□□□□ -0.54
SCG2-201ENST00000305409 PSAT1Q9Y617 370 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 SHROOM3Q8TF72 1996 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 HMX2A2RU54 273 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 SDR42E2A6NKP2 422 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms