RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ETFBP38117 255 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 CDH15P55291 814 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 TRAF2Q12933 501 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 MPP3Q13368 585 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 AGKQ53H12 422 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 GPR107Q5VW38 600 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 KLHL35Q6PF15 583 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 NIPA1Q7RTP0 329 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 UBR7Q8N806 425 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 RP9Q8TA86 221 aaKnown RBP13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ADNPQ9H2P0 1102 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 POPDC2Q9HBU9 364 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 PNPLA3Q9NST1 481 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 USP12O75317 370 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 TGM2P21980 687 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 NAMPTP43490 491 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ENTPD1P49961 510 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 SLC9B1Q4ZJI4 515 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 PDZD4Q76G19 769 aaPredicted RBP13.34□□□□□ -0.27
TRIM35-201ENST00000305364 NETO2Q8NC67 525 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 EXT2Q93063 718 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ATP6V1E2Q96A05 226 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 PKP2Q99959 881 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 OSBPL6Q9BZF3 934 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 C20orf27Q9GZN8 174 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 NMRAL1Q9HBL8 299 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 CCDC167Q9P0B6 97 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 HEATR9A2RTY3 570 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 GOLGA8TH3BQL2 631 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 STX16-NPEPL1H3BU86 382 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 SRP72O76094 671 aaKnown RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 CCDC130P13994 396 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 GRIA1P42261 906 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 FAM91A1Q658Y4 838 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 ERI1Q8IV48 349 aaKnown RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 RNF34Q969K3 372 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 ERLEC1Q96DZ1 483 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 APOL2Q9BQE5 337 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 OSBPL11Q9BXB4 747 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 GLIS2Q9BZE0 524 aaPredicted RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 TRIM15Q9C019 465 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 PIM2Q9P1W9 311 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 V9GYQ6 96 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 OGTO15294 1046 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 HDAC3O15379 428 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 ITGB3P05106 788 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 MPSTP25325 297 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 RPL14P50914 215 aaKnown RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 ITGADQ13349 1161 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 KCNJ11Q14654 390 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 SUPT20HL1Q3ZLR7 823 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 MTX3Q5HYI7 312 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 FAM160B1Q5W0V3 765 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 IL31Q6EBC2 164 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 CCDC60Q8IWA6 550 aaPredicted RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 PLD5Q8N7P1 536 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 CASP10Q92851 521 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 CCDC90BQ9GZT6 254 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 CLK4Q9HAZ1 481 aaKnown RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 RUVBL2Q9Y230 463 aaKnown RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 LAMB1P07942 1786 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 MICAL2O94851 1124 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 TFPTP0C1Z6 253 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 PPARGP37231 505 aaPredicted RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 STT3AP46977 705 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 FASTKD5Q7L8L6 764 aaKnown RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 ANKRD23Q86SG2 305 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 BRSK2Q8IWQ3 736 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 OR6B3Q8NGW1 331 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 NOL11Q9H8H0 719 aaKnown RBP13.33□□□□□ -0.28
TRIM35-201ENST00000305364 COQ10BQ9H8M1 238 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 TELO2Q9Y4R8 837 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 COMMD10Q9Y6G5 202 aa13.33□□□□□ -0.28
TRIM35-201ENST00000305364 RGL2O15211 777 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 VAPBO95292 243 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 ERBB2P04626 1255 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 LCP1P13796 627 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 CAP2P40123 477 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 GTF2A2P52657 109 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 INPP5AQ14642 412 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 POTEHQ6S545 545 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 MZB1Q8WU39 189 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 NCSTNQ92542 709 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 NAT9Q9BTE0 207 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 SNX25Q9H3E2 840 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 PXMP2Q9NR77 195 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 SNX15Q9NRS6 342 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 CNTN3Q9P232 1028 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 RREB1Q92766 1687 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 PTPRJQ12913 1337 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF839A8K0R7 811 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 DHX15O43143 795 aaKnown RBP13.32□□□□□ -0.28
TRIM35-201ENST00000305364 PTPN7P35236 360 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 JAG1P78504 1218 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 PRKAA1Q13131 559 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms