RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ZNF449Q6P9G9 518 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 TAX1BP1Q86VP1 789 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 CCDC33Q8N5R6 958 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 NPWQ8N729 165 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 BANPQ8N9N5 519 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 MTBPQ96DY7 904 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 STAMBPL1Q96FJ0 436 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 TSGA13Q96PP4 275 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 TGS1Q96RS0 853 aaKnown RBP19.96■□□□□ 0.79
HOXC4-201ENST00000303406 PLCD4Q9BRC7 762 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 ABI2Q9NYB9 513 aaPredicted RBP19.96■□□□□ 0.79
HOXC4-201ENST00000303406 NEU3Q9UQ49 428 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 MYO16Q9Y6X6 1858 aa19.96■□□□□ 0.79
HOXC4-201ENST00000303406 TANC1Q9C0D5 1861 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 SNX3O60493 162 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 SPAG7O75391 227 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 ALDH1A2O94788 518 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 MT-ND3P03897 115 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 OR4Q2P0C623 313 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 KRT4P19013 534 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 PSMB4P28070 264 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 SERPINB9P50453 376 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 MTM1Q13496 603 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 NPAS4Q8IUM7 802 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 SCN4BQ8IWT1 228 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 KLHDC8BQ8IXV7 354 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 C4orf33Q8N1A6 199 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 CRIPAKQ8N1N5 446 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 PDCD7Q8N8D1 485 aaKnown RBP19.95■□□□□ 0.78
HOXC4-201ENST00000303406 DPF3Q92784 378 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 CATSPERBQ9H7T0 1116 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 KIF9Q9HAQ2 790 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 PAK6Q9NQU5 681 aaPredicted RBP19.95■□□□□ 0.78
HOXC4-201ENST00000303406 KLHL8Q9P2G9 620 aaPredicted RBP19.95■□□□□ 0.78
HOXC4-201ENST00000303406 LRFN2Q9ULH4 789 aa19.95■□□□□ 0.78
HOXC4-201ENST00000303406 VWA8A3KMH1 1905 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 PSMD3O43242 534 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 KRT37O76014 449 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 ALDH2P05091 517 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 SLC2A3P11169 496 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 TAC1P20366 129 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 CNTFP26441 200 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 IFT88Q13099 833 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 FRG1Q14331 258 aaKnown RBP19.94■□□□□ 0.78
HOXC4-201ENST00000303406 PDK4Q16654 411 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 CTXN3Q4LDR2 81 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 PID1Q7Z2X4 250 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 PRPF39Q86UA1 669 aaKnown RBP19.94■□□□□ 0.78
HOXC4-201ENST00000303406 OTUD6BQ8N6M0 293 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 GDAP1Q8TB36 358 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 C2orf15Q8WU43 125 aaKnown RBP19.94■□□□□ 0.78
HOXC4-201ENST00000303406 CASP10Q92851 521 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 TTC17Q96AE7 1141 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 TBC1D31Q96DN5 1066 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 MRRFQ96E11 262 aaKnown RBP19.94■□□□□ 0.78
HOXC4-201ENST00000303406 GBA3Q9H227 469 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 MARCH5Q9NX47 278 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 MKS1Q9NXB0 559 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 MOCS1Q9NZB8 636 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 SEPT10Q9P0V9 454 aa19.94■□□□□ 0.78
HOXC4-201ENST00000303406 WASH4PA8MWX3 477 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 KCNU1A8MYU2 1149 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 H7C4K7 107 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 AP3B1O00203 1094 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 RTN3O95197 1032 aaPredicted RBP19.93■□□□□ 0.78
HOXC4-201ENST00000303406 AP2A1O95782 977 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 CXCL10P02778 98 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 SNRPAP09012 282 aaKnown RBP19.93■□□□□ 0.78
HOXC4-201ENST00000303406 ALADP13716 330 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 PGAM1P18669 254 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 RPA3P35244 121 aaPredicted RBP19.93■□□□□ 0.78
HOXC4-201ENST00000303406 PSEN1P49768 467 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 FAAP100Q0VG06 881 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 TEX44Q53QW1 395 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 SH2D5Q6ZV89 423 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 SPPL2BQ8TCT7 592 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 C1orf74Q96LT6 269 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 NMUR1Q9HB89 426 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 MLXIPLQ9NP71 852 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 TLR6Q9Y2C9 796 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 MAD1L1Q9Y6D9 718 aa19.93■□□□□ 0.78
HOXC4-201ENST00000303406 A0A1W2PQH9 124 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 TBC1D4O60343 1298 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 CACNG3O60359 315 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 PAGE1O75459 146 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 KRT38O76015 456 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 CCNCP24863 283 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 DNAJB2P25686 324 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 FOXN2P32314 431 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 GPR17Q13304 367 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 MTFR1Q15390 333 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 LACTB2Q53H82 288 aaPredicted RBP19.92■□□□□ 0.78
HOXC4-201ENST00000303406 ACBD5Q5T8D3 534 aaPredicted RBP19.92■□□□□ 0.78
HOXC4-201ENST00000303406 HHATQ5VTY9 493 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 FAM171A1Q5VUB5 890 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 CCDC121Q6ZUS5 278 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 MARK2Q7KZI7 788 aaKnown RBP19.92■□□□□ 0.78
HOXC4-201ENST00000303406 LRRC49Q8IUZ0 686 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 TP53INP2Q8IXH6 220 aa19.92■□□□□ 0.78
HOXC4-201ENST00000303406 MPP5Q8N3R9 675 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms